Protein Info for mRNA_3800 in Rhodosporidium toruloides IFO0880

Name: 12168
Annotation: K14715 SLC39A9, ZIP9 solute carrier family 39 (zinc transporter), member 9

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 392 transmembrane" amino acids 6 to 27 (22 residues), see Phobius details amino acids 39 to 62 (24 residues), see Phobius details amino acids 84 to 101 (18 residues), see Phobius details amino acids 211 to 230 (20 residues), see Phobius details amino acids 251 to 275 (25 residues), see Phobius details amino acids 287 to 309 (23 residues), see Phobius details amino acids 321 to 342 (22 residues), see Phobius details amino acids 369 to 389 (21 residues), see Phobius details PF02535: Zip" amino acids 11 to 383 (373 residues), 103.6 bits, see alignment E=6.9e-34

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (392 amino acids)

>mRNA_3800 K14715 SLC39A9, ZIP9 solute carrier family 39 (zinc transporter), member 9 (Rhodosporidium toruloides IFO0880)
MGFAHLAALASAMAAATLLASFLPLYISLSPKAVTRTSTYATGLLCGAALSIVIPEGVTA
VFENSGGGDDGSSTGVEDAHESNSGWIGAALLAGFLLMYLVDSLHGHDEYPDPNPRSPHH
HRHHHHHHHRHTRPRFHPTPSREAELEPLANGGGNSLSRDSSPERVAGKPQDDHELRWEE
SGGDSSASSRCRSPCPSGDDSNLIKADASSISTVIGLLAHSIADGVSLGASSLPTSASSI
ADSPSSSSSLQLIVFVAIMLHKAPTAFALSSILSSSPATSRAFVRRALILFSLAAPLGAL
ATYTLLSLLSNHAAGSTSTGWWTGLALVFSGGTFLFVATHVVREQEKKHERAEGEPGAMR
DEERIGDKARVALVVAGMVTPAILGRIVGHGH