Protein Info for mRNA_4015 in Rhodosporidium toruloides IFO0880

Name: 12383
Annotation: K04512 DAAM dishevelled associated activator of morphogenesis

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1698 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF06371: Drf_GBD" amino acids 372 to 654 (283 residues), 103.2 bits, see alignment E=2.1e-33 PF06367: Drf_FH3" amino acids 660 to 796 (137 residues), 56.9 bits, see alignment E=3.4e-19 PF02181: FH2" amino acids 1249 to 1615 (367 residues), 280.7 bits, see alignment E=3.1e-87

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1698 amino acids)

>mRNA_4015 K04512 DAAM dishevelled associated activator of morphogenesis (Rhodosporidium toruloides IFO0880)
MEKLLVQLSLPGPASSVHATFIASSATLEDLVRQLLAEDGPQIRRSVCLLDPALTVGEAL
GTIPDATQPEHFSDFLLSGHLHKPALRLVCVPHAALFTFFHIPAFPEGWQFRLFLAADMT
AGETIEALIEELGVRKVVVQGHKSARVEYCLRTAGSRGVPETIPTPTRLLTRLQKDAIDA
ATPLRAEFTVSPSWLKKAGTVAFALPGVGRSESTDAETSNAKQPIAKRDGTNWRPSSLFG
GFWGGEAEPSDTSSNAANAPSSKQPTAASPDEGEEEEGEGTLKAEKGASATASADMSSVR
SNAGNRSRLSTLFTDWIAPEASNSSASPSRQHARVVGEPVAMSKDLSRRFSSFVPNTAEM
DPASSDADGSVDEGDMDNALERLMDDLGMKEAQRAAMRQLPQDRKRFLVEQHRSNQPTTP
IRPSKTGPATEAGLLENVKRFSLASVGWGGLASPPLDVMGPQPKPLSSPVRESPSQLSPH
IQTQPTGSSSSWTSWWSSSSNATGTGQPSGHIAKDSPQFYADQLRSTKITSRSLAKHLIA
LRVRLSTAKLAWAADFVDDAGGLDALEAVLARSMRSRTGQDGEHRPRQDGDLSEEEKTVQ
AECIKCLRALLNTELGFSRILARPALIATLVQCLYLPHNKLRALVADVIAAICVLSLDDG
HRLVLAAFSDARIIAGEKFRFESFIGSIEAPDIPDDTTVSDNEPAIPDSGDDGFWEWRTA
AMSLVTAIVNTPHDLEERLMLRDEFARRGLNEAMIGLRYLQPPDFFMTQLNVYAEERQED
QEELHERTAGRTRADASDLPLGELIKLAQEHEELYPRLLDTVKNYVKVFDRKQLDDQLRD
DLVTILDNFVGHAAHLEDFDRGWRTFMRQYLSSVQHIVGQQSLIRTPRVAETATVPTSFI
EELETLRTKVDELSDERASLREELEHQIAETNTLRSLPVGRDTAVDPNGSSSIPKGEGES
FAGVIQRLVQKEKEVLELQAKLAAVDVRQSPDADDAKKDRLNQSKRWENLLGEIGQNKLK
IATLESTIEARDKEIKFLKRTLESVYSRFQSTVVSATRIPGNVPSEAPAKELDHEAMATR
TLEALSQRDEQIKELQLALEKAKAEVIKLKNAGQTRAPLAPAASAPDASATPSSPASPPP
PPPAPPPPLAPPVSFPRPPPPPPPPPPPPAALRRAHTVPGTVTTSSARSSPAASPVTSVP
PPPPPPPPPPPRLPSAPSAPSAPLLGGPRPPPPPAPPVAALRGPRDPQSAKPPAKKMKPF
FWSKLPSERLTTSIWDTSESSVIEVDVAALEQDFTVGSSKPHEVQAGAKLKKKEAVTLLG
HTRAQNIAIMLARLRLPPAAIKEAIVRLDDATLSVDNLKAIKHYVELIRGFEGEIKSLST
ADQYFAEIASIPRLSERLAAMVYRRRLDMEMEELKPDLAMLRSACDELRSSRKLKQLLQV
VLTIGNALNGSTFRGNAAGFSLDSLLKARLILKDVRSATASPATPTLLHYLVRVASKQDS
GLLDFHNDLPHLEAASRISSATTMQTVQTLVAGAKQVEQELDVLRESRMLGADDRFVQVM
EQFVRHAKPAMKALQEHAATIDGELKTLLRYVGEDPAQTKPEELFDLVAQFASMLSRARA
EVEAADAEAAKKQANLSPPSPEKEPVKVGRLRPPLPHRNSSQETVTAASGTLGRGQFDTV
LRDLRNGVSLARSRLYRA