Protein Info for mRNA_4127 in Rhodosporidium toruloides IFO0880

Name: 12495
Annotation: K00793 ribE, RIB5 riboflavin synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR00187: riboflavin synthase, alpha subunit
  • amino acids 1 to 217 (217 residues), 200.7 bits, E=7.7e-64
• PF00677: Lum_binding
  • amino acids 3 to 91 (89 residues), 75.7 bits, E=1.1e-25
  • amino acids 104 to 202 (99 residues), 68.5 bits, E=2e-23

Predicted SEED Role

"Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)" (EC 2.5.1.9)

MetaCyc Pathways

• flavin biosynthesis I (bacteria and plants) (6/9 steps found)
• flavin biosynthesis III (fungi) (6/9 steps found)
• flavin biosynthesis II (archaea) (4/10 steps found)

KEGG Metabolic Maps

• Riboflavin metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.5.1.9

Protein Sequence (246 amino acids)

>mRNA_4127 K00793 ribE, RIB5 riboflavin synthase (Rhodosporidium toruloides IFO0880)
MFTGLVEHLGVIKSIHPTTEFEGYSFVIGDAGEILGDCAIGDSIATNGVCLTVTRFDAKE
GWFEVGLANETLSRTNLGKLGVGSKVNLERAMAGHGRFGGHFVQGHVDTTAKIVSITPDG
DSIRLLFSLPLEFYTPLIPKGYIALDGTSLTLTHLSVPKEGDEHYEPGTPKGLFGVMLVK
HTQSRTVVAMKSVGDTVNVECDVVGKGVESVVRNVLEGGGETGGALEQMIERAVERVLAR
KGLVKE