Protein Info for mRNA_4345 in Rhodosporidium toruloides IFO0880

Name: 12713
Annotation: K04706 PIAS1 E3 SUMO-protein ligase PIAS1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 621 PF14324: PINIT" amino acids 165 to 319 (155 residues), 128.9 bits, see alignment E=2e-41 PF02891: zf-MIZ" amino acids 362 to 409 (48 residues), 66.1 bits, see alignment 1.9e-22

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (621 amino acids)

>mRNA_4345 K04706 PIAS1 E3 SUMO-protein ligase PIAS1 (Rhodosporidium toruloides IFO0880)
MTVDRLKNAIRSINNTLFTNLRVTGKKNDLYQSLLDVVVSEYSRPDKTRFYTCKRLISEA
KSSTAPYSSPTTGGGGGSRGTWVYTGDGASGSGLGANGYAVGHDYGAGSAGSSPGYGASG
SGYGGAYGAGVSNRLPPPKFGAGSGGAGASGSGSWQNQRLEEIPIKFRPSPFYRIDKALS
TVVTLTKAPQGDRKVGTCSFTFTEAQRALLAKAKESPSNPQYQVRLYCTSDVNWNLHRPT
ANQFPAPIEFPGTCEIKLNGVTVPANTKGIKKQPGTAPPVNLSSGKGATVLTTAGSTNRV
EVIYINTEKLYFLVCYLVEYTPVESVVGKVKSGKTKSKEEVIKSIVDLNSDEDVEASSFR
LDLKDPLSFLRIAIPIRSAHCSHIACFDASIWFEMNEQTPQWQCPICNKTLKVDDIVVDG
YFEDILKICPSSVESVTVEPDGTWRSDDNKHGTAKPRTAPASAAGSGRNTPVTAPDPGKL
NSLNGLNANGKGKARASSAMASEALTLDSDTDEDDERPAKRSRVSGTAPMTASGTGTPGS
SASANGLASRANEVLDLTLDSDDDNPPPQAAARGPVRPSLGMARTGSSEKKTVAEVQADI
DQMNERMKRDYGENWRDQFGY