Protein Info for mRNA_4490 in Rhodosporidium toruloides IFO0880

Name: 12858
Annotation: KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 361 PF08659: KR" amino acids 26 to 136 (111 residues), 24.1 bits, see alignment E=3.1e-09

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (361 amino acids)

>mRNA_4490 KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (Rhodosporidium toruloides IFO0880)
MSNIVASFQRSKFDQTKVPDLSGKVFVLTGGTNGIGLSVSRTLFKHGGRAILLGSKQETG
DAACEYIKTGDLDKAPHDYKEGFGAQRDNSANGATKDGQVEWRLMDGTDLKEVADVAKTL
AGELDRLDGFLAIAGLGVNAFELTKDGYDSHLTVNCLTHILLLSQLLPILEKTSRNHPDA
DVRFISMASEMHRFTFGGPSEKWGGSSFADEEEFKKDVGPNNLYSRTKLGNILTVKALVD
KYLQPPSKILAYAVHPGGVATGQNDQIKPAYGETLGKVVETLVRPILRAPDDGALSTLWA
ATAPEARSGEFENGTYYTDPAEPGKETSEATDPELINNFWNTSLSILEKVVGKENVGPFK
G