Protein Info for mRNA_4542 in Rhodosporidium toruloides IFO0880

Name: 12910
Annotation: K05302 SETD6 N-lysine methyltransferase SETD6

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 452 PF00856: SET" amino acids 35 to 251 (217 residues), 55.5 bits, see alignment E=9.5e-19 PF09273: Rubis-subs-bind" amino acids 296 to 406 (111 residues), 61.9 bits, see alignment E=1.1e-20

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (452 amino acids)

>mRNA_4542 K05302 SETD6 N-lysine methyltransferase SETD6 (Rhodosporidium toruloides IFO0880)
MSSSPTDEGKFLDWFKEKGGTVHRAVAFKQFEGMGRGCVALEDIEPDTLLFSIPRSILLT
TSTSALPSLLPAEEFAPLSGWTPLILSMMYEYLRTSSWEPYFSLLPTQFESLMFWSPEEF
EELEGSTVLNKVGRDEADEEFEQTVKPFVAKHANVFGNPDNYTAELFHRMGSLVLSRSFH
VDAKEPEEDEDSDEEEEEREDVGDVAMVPFADILNAKSGLLPQARLFFELNTLDMMSTAR
ISAGSQIFNTYADPPNSDLLRRYGHVDEVNEADLVEVGLETVVDLVGQAQGLEEEEREAK
AEWLLELGIDDTFSIETNYKIPEEMVSAIKAFLLTPEEYAKAQKKESPPKPKLDAASADW
ARKILDKRLSEYKTSIEEDEALLKESALPQRKRMAVIVRLGEKRILRGARAKLDEEWPAD
GGDASAMQKDKKRSRDAGKGEAGSKKQKKAKQ