Protein Info for mRNA_4544 in Rhodosporidium toruloides IFO0880
Name: 12912
Annotation: K01251 E3.3.1.1, ahcY adenosylhomocysteinase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 76% identical to SAHH_DICDI: Adenosylhomocysteinase (sahA) from Dictyostelium discoideum
KEGG orthology group: K01251, adenosylhomocysteinase [EC: 3.3.1.1] (inferred from 76% identity to ddi:DDB_G0267418)Predicted SEED Role
"Adenosylhomocysteinase (EC 3.3.1.1)" in subsystem Methionine Biosynthesis or Methionine Degradation (EC 3.3.1.1)
MetaCyc Pathways
- S-adenosyl-L-methionine salvage II (3/3 steps found)
- superpathway of L-cysteine biosynthesis (mammalian) (4/5 steps found)
- L-methionine degradation I (to L-homocysteine) (2/3 steps found)
- superpathway of L-methionine salvage and degradation (7/16 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.3.1.1
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (443 amino acids)
>mRNA_4544 K01251 E3.3.1.1, ahcY adenosylhomocysteinase (Rhodosporidium toruloides IFO0880) MVYKVADISLAAWGRKEIVLAENEMPGLMYLREKYGPSQPLKGARIAGCLHMTIQTAVLI ETLTALGAQVAWSSCNIFSTQDQAAAAIAATGVPVFAWKGETEEEYLWCIDQTLKAFPNG EPLNMILDDGGDLTALVHDKYPELLAGINGVSEETTTGVHHLYKLHKEGKLKIPAINVND AVTKSKFDNLYGCRESLVDGIKRATDVMLAGKVAVVAGYGDVGKGCAESLRSYGARCIIT EIDPINALQAAMAGFEVTTMEEAAPQGNVFVTTTGCRDILRAEHFEVMPEDAIVCNIGEQ RCCRAFKTPGCHFDCEIDVAWIKANAKEHVNIKPQVDRYTMNSGRHIILLAEGRLVNLGC ATGHPSWVMSCSFTNQVLAQIALWTDIKSYPLGVHILPKALDEEVARAHLQSLNVKLTKM TKVQADYLGLPVEGPYKPEHYRY