Protein Info for mRNA_4918 in Rhodosporidium toruloides IFO0880

Name: 13286
Annotation: K00327 POR NADPH-ferrihemoprotein reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 739 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details transmembrane" amino acids 660 to 675 (16 residues), see Phobius details PF00258: Flavodoxin_1" amino acids 74 to 215 (142 residues), 117.1 bits, see alignment E=1.1e-37 PF00667: FAD_binding_1" amino acids 270 to 490 (221 residues), 200.1 bits, see alignment E=5.8e-63 PF00175: NAD_binding_1" amino acids 553 to 649 (97 residues), 54 bits, see alignment E=3.7e-18

Best Hits

KEGG orthology group: K00327, NADPH-ferrihemoprotein reductase [EC: 1.6.2.4] (inferred from 57% identity to cne:CND01320)

Predicted SEED Role

No annotation

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.6.2.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (739 amino acids)

>mRNA_4918 K00327 POR NADPH-ferrihemoprotein reductase (Rhodosporidium toruloides IFO0880)
MVQLAHIVLALAIAGGAYFLFFRNKSDSNSSSPAAAAVVNGAAAKGANGASGEAVDTGRD
FVASLNLSNKKCVIFYGSQTGTAEDYGTRIAKEIKSRYGISSLVCDPEDYDFDNLDAVPE
DHLVVFCMATYGEGEPTDNAVQLMDFLKEEPQFSNGTSLENLRYVIFGLGNSTYEHFNAV
SRNLDARLTELGAHRVGPRGEGDDDKSMEEDYLAWKDEMFDAIHKQLGWEEGAGGDVADF
EVRELDEVDEAKVYLGELSARALTGARGVFDAKNPFPAPLIQAKELFEDGERNCVFAEFD
ITDSGIRYQTGDHVAVWPVNPNDEVERTLHILGLADKRHKVIEVKSLDPALAKVPFPIPT
TYETVFRHYLDISAHASRQTVGQMAKFAPTDAAREMLEKLGADKEFYHEVVGSKCLRLSE
VLVLAAGNADTVWNIPVDRIIGAIHRLQPRYYSISSSPKMYPNSIHVTAVVLKYEPVVGA
NKVFGVGTNYLLNLKNAANGTLEKVEAREQGTPVYHLEGPRGKYKKDTHFAAPIHVRRST
FRLPTSPKVPIVMIGPGTGVAPFRGFIQDRVALARKAKEKDGPDALKDWGTIDLFYGCRR
STWDFLYKDEWDQYAKELEGKFRMHCAFSREPGQPKVYVQQLLRNEGDRVGEALVQNKGY
AYIWCVGVVLIPSLASPREGLADFRLYLAHSGDAGSMAKQVERELAHILGKAKGGSDEDG
EKELKLLKDRNRLLLDVWS