Protein Info for mRNA_4969 in Rhodosporidium toruloides IFO0880

Name: 13337
Annotation: K20456 OSBP oxysterol-binding protein 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1237 PF00169: PH" amino acids 367 to 462 (96 residues), 43.7 bits, see alignment 1.1e-14 PF01237: Oxysterol_BP" amino acids 817 to 1197 (381 residues), 439.2 bits, see alignment E=3.5e-135

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1237 amino acids)

>mRNA_4969 K20456 OSBP oxysterol-binding protein 1 (Rhodosporidium toruloides IFO0880)
MPSLPTRIASLARSASTRSVSSTVSDAEQMPPPPVPSHSSTPDAQLADDQKASPEESLKA
YQLLEALRKGDASQITPLLDEVSAAAKHPAVNEFGEQRRTSTPLHLAVRCAKYPTVELVF
RHQPSAVNSQDSRGQTPLHLASSLDRRDVLSFFLAQEDTNDMVRDQTGKTGLEVAASPEA
ATQISVSRSKWNEMYLAHLAAYIASPASDSASSSKRTSLTMDSPRMSTSSLAPPPPNSSS
TSPVSAASGHVSNAAAEKLYHFITKPRSRCCDFSIRDSASGTTILHEAARRKDLGLIKPV
LSKGGDVLARDKRGKLAIDLAKDQRIKDVLRQAANSEGRALQAASTPGVSAPGSNAGGAP
TLGQAPVMKGYLQKWTNVAKGYKPRWFVLDNGHLSYYRSQEDEGKASRGSINMSIAKIDP
PGTDKLKFTVGSRLGKTSPALYLKGNHPVEVMRWVDALRQNIELARGDNGLQRTPTSAST
APSLAPSFTTETRRPSTTALIGSSPAQSFGAASIDEDNETVNDEDSPPHAEDFHLMAQGA
KTQLETTQRLLASLVDGGDASSQEDIKDALQRSLKTLDQLLDDYVDTVGQRERFFARRYE
KELDAKRMWEESLREVATQHAAIEVELQKTAKQNTARKRALQEVRANLGAITPAMSPRNS
VSVQDGERPVINALPEDGTPALPSPLRSPTLTIDTKSRSRGTTITSLSPSRARTRAGTAV
QPLAPAELEQIVHNALHNEEGGETSEEEDEDEFFEAVETGAIPVEDEIHAESGADRQSKM
SAPAQELISNTDLTPYKGYEHRRTSLPIKNDNRPSVSLWAILKGSIGKDLTKISFPVYFN
EPTSMLQRMAEDMEFSECLDAAAAEHDSSKRIAYVAAFAMSNYSSTSGRIAKPFNPLLAE
TFEYVELDKKYRYVSEQVSHHPPISACIGQSPSWEYYGMVNAQSKFLGRSFEIRPTGTAH
VTLRLPADRAPPGCPPCKTMPNMVEEHYSWLKVTTEISGFLTGSINIAHYGDMVVTNHRT
GETCTLTFKPRGWRNSNAREIKGEVVDAQGNRKWEIAGKWDSQLVARRAGVGSGELAPDA
SLPTDHAGEVAPEYIRLWKNSPKPPNMPFNLTPYAITLNDLNDELKPWIPPTDCRLRPDQ
HAFEAGNFERANELKTELEEYQRDTRRKRERGELPPHKPRWFSRSTDQDTGELIWQPART
SEGQLEYWEERQRVGRAKVEGQKEEWREVDHIFHVEV