Protein Info for mRNA_4993 in Rhodosporidium toruloides IFO0880

Name: 13361
Annotation: K20660 CYP709 cytochrome P450, family 709

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 596 transmembrane" amino acids 15 to 41 (27 residues), see Phobius details PF00067: p450" amino acids 51 to 556 (506 residues), 207.3 bits, see alignment E=2.1e-65

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (596 amino acids)

>mRNA_4993 K20660 CYP709 cytochrome P450, family 709 (Rhodosporidium toruloides IFO0880)
MDKVEHALAFGWAHPILSAAALLLGCVVSYAVYLLGCAIVLPRLSPLRDLPGPPPESLLY
GNVKRILQDPPGVPHIEWNDKYGGVVQYRGFFGETRLLLFDPTALNHVLLSNAYDYPKPE
EVRGDLALILGRGVLFAEGEDHRRQRRIMNPSFGPAHLRELVPSFFEHANELRDVWKDLI
AQGHSDEKVWKDEEKAQEYARTKPEGEALVNVIAWLNRLTLDIIGDAGFGYRFDAVAQHN
NALGAAFSSMFSPRAAARKPTPYRIMLQRTIGFFVRKLPILKIADWVPNERFKQVREGFR
TVQSESDKIIQLKMNDAVEKDGVESVRAGKDLIALLLKSTQGEGKAKMTQAELRGQLTTF
LLAGHETTSTALTWTLLTLSRQPEAQEKLRREIRAARRKARSEGREELESRELDALPYLD
GVAREILRLEAPVSATVRHAGKDDFIPLGTPVRSRSNPDRLISSIPIKKGQTVFIPILAV
NRSKKIFGDDAHEFRPERWMQSENAEGKKIEGGVGVYSQILTFLAGPRSCIGYKFAVLEL
KAILSVLIDNFEFSLRDPDFEVEHRSIIVTRPLVVGEETDGNKMPLRVRLAKRDEE