Protein Info for mRNA_5035 in Rhodosporidium toruloides IFO0880

Name: 13403
Annotation: K11304 TIP60, KAT5, ESA1 histone acetyltransferase HTATIP

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 570 PF11717: Tudor-knot" amino acids 29 to 131 (103 residues), 62.8 bits, see alignment E=3.5e-21 PF17772: zf-MYST" amino acids 289 to 343 (55 residues), 80 bits, see alignment 1.2e-26 PF01853: MOZ_SAS" amino acids 348 to 525 (178 residues), 274.7 bits, see alignment E=4.9e-86

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (570 amino acids)

>mRNA_5035 K11304 TIP60, KAT5, ESA1 histone acetyltransferase HTATIP (Rhodosporidium toruloides IFO0880)
MGAPTAPPSTDPPPKPIISPPNTLILSQIVTGCKVFVQRPIHPDRPDELEVRKAEILSIR
ERKLGRAERKERKARLKAAQNEGAEAEAELKRKEEEEEEKRRQEGDRLEYYCHYVEFNKR
LDEWVAASRILLSREVEWPLPPAPPAPAPGSTRKNSREASLVPPASPSPAPSSISGSAAE
TKKAIDAGNVLRKAAIKAAHEQSVTNKRKAVDGDEDADGEDEDADGELDSDGDAAMADAQ
TGDDASTQADGATDGSEDGNIPTFSKAREIEKLRTQGSMTQSQSEISRVKNLDRIQIGKH
LVEAWYFSPYPVEYAHTPVLYVCEFCLSFYASEKQIERHRHKCTLLHPPGNEIYRHEDIS
FFEIDGRKQKTWCRNLCLLSKAFLDHKTLYYDVDPFLFYVMCVRDEYGVHLVGYFSKEKE
SAEAYNVACILTLPQYQRMGYGKLLIEFSYELSKKEQRLGSPEKPLSDLGLLSYRAYWAE
TIVELLINTKDDISIDEIANRTAITTNDVFATCQVLRLLKFYKGQHHLVVSPAVLEQHER
VKAKVRRRIEPSKLVWRPPVFSRQELRFGF