Protein Info for mRNA_5090 in Rhodosporidium toruloides IFO0880

Name: 13458
Annotation: K08900 BCS1 mitochondrial chaperone BCS1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 518 signal peptide" amino acids 1 to 18 (18 residues), see Phobius details PF08740: BCS1_N" amino acids 75 to 261 (187 residues), 174.3 bits, see alignment E=2.8e-55 PF00004: AAA" amino acids 297 to 418 (122 residues), 73 bits, see alignment E=3.2e-24

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (518 amino acids)

>mRNA_5090 K08900 BCS1 mitochondrial chaperone BCS1 (Rhodosporidium toruloides IFO0880)
MPMLLPQTATAPNNASASGPPPSTPPDSLSPPPGDLAERTVEAAGVDKPTGLRGLVQSAL
DSNPYFSAGFGLMALGVGAQVLRRSAVHAATLAQRRLLVSLEISSKDPSYLWVLQWMSAQ
SARQAQLAKKPMRGIEGLASRIRSHELAVETKYEQRKDGSSTAEFSLVPGPGTHFFRYKD
AWFQVKRERATNMLDLNSGTPWETVHLTTLSRDRDLFPLLLSEARQLAQQAQVGRTVIYT
AWGAEWRPFGRPREKRLLESVVLDKGVKERVVDDVRAFMGRGKWYSERGIPYRRGYLLYG
PPGSGKSSFIQALAGSLDYNICVLNLSERGLTDDKLNHLLANAPERSIMLLEDIDAAFSQ
RQQSGEAGFSANVTFSGLLNALDGVASSTSQRILFLTTNHIEKLDPALIRPGRVDLKEII
DDATPYQASELFTRFYHDEADLSEDRFVELRDRLVQDVEAALKEGSRVSMAALQGHFIRN
SAKEAVDGWPELRRMAEMDAALRTSAAGQPHVRFASSP