Protein Info for mRNA_5113 in Rhodosporidium toruloides IFO0880

Name: 13481
Annotation: KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 466 transmembrane" amino acids 140 to 158 (19 residues), see Phobius details amino acids 174 to 194 (21 residues), see Phobius details amino acids 206 to 228 (23 residues), see Phobius details amino acids 234 to 252 (19 residues), see Phobius details amino acids 263 to 280 (18 residues), see Phobius details amino acids 286 to 305 (20 residues), see Phobius details amino acids 317 to 335 (19 residues), see Phobius details amino acids 355 to 376 (22 residues), see Phobius details amino acids 384 to 404 (21 residues), see Phobius details amino acids 410 to 428 (19 residues), see Phobius details PF00892: EamA" amino acids 144 to 275 (132 residues), 28.8 bits, see alignment E=1.9e-10 PF03151: TPT" amino acids 144 to 426 (283 residues), 70.3 bits, see alignment E=2.8e-23 PF08449: UAA" amino acids 210 to 427 (218 residues), 39.3 bits, see alignment E=7.3e-14

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (466 amino acids)

>mRNA_5113 KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter (Rhodosporidium toruloides IFO0880)
MDAVTVAGTVGLPPGHRAGQASRGNATTLREPPLGDSILPSSTQLAYSTETRVRMANSPA
SSTATSRANSPVLANGPTLRRLAVPPGADSANGGIFRRKSPAPLVLRKDEPLVRRLSLAV
QDYALAAAHPSTYVSFIRSLHPSLLAFFLISVSATLSNKHLLRGFFHGLTYSLTAWQMAC
ATGGTVLAARVGAYRPYKVKQRHERIVQAVAVVFSCEILCSNLALRLVPVPFHVSLRAAS
PILTLLLSVIFFHDRTTLRTSSSLLMVLLGVSLTSHHEAWLSPGSVLLILSALLLTTKSL
LVSQLLQERMHLAPLDILARTAPLSMLHCALFAVLNGEPRRLWTFVRSKEFTSAHLAMVA
LNGVLSFSGVVMGLVADKKTRPPLLSITTHAAQASTILFSLFFFSLRLSPLNFLGVGLTL
AGGVLYARYDARDKEEEEGLGGEGLPLRSPAATGDGAEGKEKGFLD