Protein Info for mRNA_5294 in Rhodosporidium toruloides IFO0880

Name: 13662
Annotation: K02830 HRAD1, RAD17 cell cycle checkpoint protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 381 PF02144: Rad1" amino acids 8 to 351 (344 residues), 255.4 bits, see alignment E=2.7e-80

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (381 amino acids)

>mRNA_5294 K02830 HRAD1, RAD17 cell cycle checkpoint protein (Rhodosporidium toruloides IFO0880)
MARDTQQILQADMPDVRPLASILRSLNFKSQATLKIDQAGLRVTVEEGRSLQAHAYIAAS
AFSSYAFELDADNPAAYTDVPPTSSSRDDSPFASSPAPEASGPPYCQMTVSLSTMIECLN
IFGNAGGASTSAFKREFDDEDEDGGSGWKGKRRRMDSEDVDDERRGGQRRGAGTDDGKTT
SLRLSYAGRGEPLVMLLEEGGIVTRCEITTYEPEGLLDLTFQDEDKVQRLIIKSEWLRDA
LLEVPSSSEKLAISFFPEDHARTNYHADDPTMRNEEEEVPLFRLESVGPMGITEMDYSED
KDVLEVFECEHPIRNSYKYQHILLTRNALHASIKTSIRTDPDGLLSFQFMIPLSPRGAKA
SMKEDKIGFVEFLVVALDDEY