Protein Info for mRNA_5428 in Rhodosporidium toruloides IFO0880

Name: 13796
Annotation: KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 542 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF00067: p450" amino acids 50 to 456 (407 residues), 192.7 bits, see alignment E=5.6e-61

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Find the best match in UniProt

Protein Sequence (542 amino acids)

>mRNA_5428 KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies (Rhodosporidium toruloides IFO0880)
MDSLDQAQLVLTACGTLLAALLSYALYCRFFHPLAGIPGPLRAQFGIGGWLTVRGAKRDF
GWELKALHDKHGPCVRIGRNMVSVTDPRAVDDLYKFGGPVKDKAPFYQFFKVTKPSLLAT
LPHSQHQLARRSVSPAFAMNVLLDLEEYVDTCFDEICEYFDRQIQKDGGKATVNMGDMLQ
FLAMDAVGEIAFGRSFGLCKAGYDTEQYLPMIDAYTASSCLSGTQPWARPVLHRWITRKL
GSSGAAALGQKASQAVALRLEEMRKAAETGDDSGLRRDMLNRLVAAKNADGSPFTIEQVK
VQANSILGAGSDTTSITFRALLAYIIKDERVYRKVMSELDEAIENGTVSFPISQAAGSKL
TYFQACLKETLRLHPAVPWVLPRVVPAGGAVIGGRYFAGGVHIGMSPFVYQRTDVYGPDA
EVFRPERWIEASDEERKAMEKNLLTFGSGNRVCIGKFRRRRELARLTTLARQHVALLEIT
KLAPSLLHRYRLRFTPRGPSSPHKLPGRSVDGKWDDAEPWHCESQWFAHQRDFWMDIEER
AA