Protein Info for mRNA_5470 in Rhodosporidium toruloides IFO0880

Name: 13838
Annotation: K00599 METTL6 methyltransferase-like protein 6

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 365 PF13847: Methyltransf_31" amino acids 126 to 252 (127 residues), 41.6 bits, see alignment E=3.5e-14 PF13489: Methyltransf_23" amino acids 126 to 264 (139 residues), 41.4 bits, see alignment E=4.1e-14 PF05175: MTS" amino acids 127 to 189 (63 residues), 21.6 bits, see alignment E=4.3e-08 PF08241: Methyltransf_11" amino acids 131 to 245 (115 residues), 32.9 bits, see alignment E=2.5e-11 PF08242: Methyltransf_12" amino acids 131 to 243 (113 residues), 44.3 bits, see alignment E=7.6e-15 PF13649: Methyltransf_25" amino acids 131 to 241 (111 residues), 42.6 bits, see alignment E=2.4e-14

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (365 amino acids)

>mRNA_5470 K00599 METTL6 methyltransferase-like protein 6 (Rhodosporidium toruloides IFO0880)
MADSATETATGPFEPATVSPSVPFSSSSTSSVELSRTTKKTRKPRIVLEGTAEEILKRNN
TAASRTFVEGLIQRAGTNWNRFYTNHAAAGPFFKDRHWLDREWEELKELGGPADGATDVE
GRPSGTGKTMLEVGCGTGATIYPLLERYPRARFVAFDFAKKAVELTKSHASYDPTHTHIF
QHDLTKPLDDLYAKLDDVPPEFGLAVRQFDIVSCVFVLSALAPRCQAKAMETLLALVAPG
GSLLFRDYALHDAAQLRFHSLPSASYASNPSLLSPQTDASASPDSSTPSDPSFDDSNRPF
YRRGDNTLTYFFTANEIQSHVDEAAHALGIEVEGKCEVVEREMENRKEQWGCTRRFVHAS
WRRVR