Protein Info for mRNA_5537 in Rhodosporidium toruloides IFO0880

Name: 13905
Annotation: K14766 NOP14, UTP2 nucleolar protein 14

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1067 PF04147: Nop14" amino acids 50 to 264 (215 residues), 207.4 bits, see alignment E=2.2e-65 amino acids 372 to 1010 (639 residues), 607.6 bits, see alignment E=2.4e-186

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1067 amino acids)

>mRNA_5537 K14766 NOP14, UTP2 nucleolar protein 14 (Rhodosporidium toruloides IFO0880)
MGGSQLTQLRAKLRDSGLNRQANPKDARKRAKQRKDLSSNSAQHRNAKLAAIHDQFNVFD
TRDEKKKFQVVSRSGKEEGGGTKGMPGRARAAGIEARKKTLLPMLEARTHASTFVDHRFG
EAASHLTPEEKALERFTAERKSRLDKKMRFNLEDDDGGEFALTHGGRKLGFGDEDQLEDG
GWGGLGEGANREPLMNRRKMGAEPEEDEEPRKKSHAEIMDEVIAKSKFHKAERQKMKSAD
DETRLELDAELKDLRGILAGGAVSRGAASEKGSGSWATGAPEPAEDDEEEDEDEEDDEDE
EEDVEDGDDSDADSDESGSTYELNDEELEAALAASSAKSGVDRDLLRKLIGSAADRSPSP
SPPPASRSASAAVDGERPPPAKSAADDDDEDSKDPYDIYVRELALEPRAHATNRLKTPLE
LAQEAAEQLKKQEERRLKRQRGEEDRWSDEEDGAEDGKRKKKEKKRAPQGDDLDDFLEEQ
YGSDVDESAAPAVAVGGLGQGLEGEGVLLADEDGSAEGSDEEEGEEDGSEGEEDEEQSEM
DEMDVGDLDATDSEEEEAAQGETEALVAPSTAAFDKSGELPYTFPCPTTHAEFAKLLRSS
GIKDEDTITVVKRIRTLYHPGLAEGNKEKLQVFANVLLDHIVYLCTSPSPSTFATVNSLL
PQLLTMSHAYPLSSAPHCVSKLSLMHRNLLHGLIRGPLDPAAKTWPGLAELTLLRLIGMV
WSTSDLSHPVAAPALLLIGEYLSQARVRSLSDLASGIFLVSLVAQFEEQSKRIVPEAVNF
LANSLALLFPTTSAVSATSFPGFFPAPDVGQEHAKQLKLGRDSSSLEPSKSINLLEALAA
KGKNGKGKASAAEAAQLKVDLAASALKLVETYRAMYSESEAFIEVFRPIEAILKAVKLEK
LSPSLQNNVKSTLDALSRSLTFAGQSRRPLFLQHHKPIPLATYLPKFDEGFNPNRRFDPD
SERAAASKLRALYKKEKKGAVRELRNDNKFLAVESAKRRAEEDQQYQRKVCLAALLPLPS
PVTDTTSPVAQIQKLVGSLQDERAEEKAFERTKAKGKRRDKARAGGR