Protein Info for mRNA_5664 in Rhodosporidium toruloides IFO0880

Name: 14032
Annotation: K01262 pepP Xaa-Pro aminopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 546 PF05195: AMP_N" amino acids 91 to 209 (119 residues), 144.2 bits, see alignment E=1.7e-46 PF00557: Peptidase_M24" amino acids 287 to 509 (223 residues), 168.1 bits, see alignment E=2.3e-53

Best Hits

Predicted SEED Role

"Xaa-Pro aminopeptidase (EC 3.4.11.9)" (EC 3.4.11.9)

Isozymes

Compare fitness of predicted isozymes for: 3.4.11.9

Use Curated BLAST to search for 3.4.11.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (546 amino acids)

>mRNA_5664 K01262 pepP Xaa-Pro aminopeptidase (Rhodosporidium toruloides IFO0880)
MGFRGGRAALRSAVTRLESRTARPQTPTLPLALPHPRHSSSTPQPLSHPHGHHAAFQSHT
TTKAYGQPLPSTHPHLLAPGELTPGISAKEYEQRRRKLMDRLEDNAVVVIAGGQIQYMTQ
NIFYRFRQRSNFWYLTGFEEPDSALILEKDSSARGHKMTLFCRPKDAYEELWNGARTGLE
GVMEVFGADEACDSSRFGHRLQQILSHNARGPVYIDLPSHSLSTFSRTRPRSPSCSFLSY
LSLAGKDPGRDEVDEVMKALEKRDVRSAEKEVEKLRLIKSEAEVRVMRRAADISADAHAK
VMRFTRPGLPESSLVAHFSYHTSLSGSPRLAYVPVCASGAQALTIHYIENNRPVKEGEML
LIDAGCEWGGYASDITRTFPASGTFSTPQAHLYEAVLRVVRACTKRCTSSTSWTFEDLHR
YSVDLTRTELRDLGFEMRAGELERVLYPHFVGHPIGVDLHDTRSYGRDERLQEGMVVTVE
PGITVPPLAHFPKHFHNLTVRIEDEVLVRKDDCVVLSVDAPKELVDVEACCQGFLEGVRG
EKASQG