Protein Info for mRNA_5668 in Rhodosporidium toruloides IFO0880

Name: 14036
Annotation: K01227 E3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 727 PF03644: Glyco_hydro_85" amino acids 74 to 456 (383 residues), 286 bits, see alignment E=2.1e-89

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Find the best match in UniProt

Protein Sequence (727 amino acids)

>mRNA_5668 K01227 E3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (Rhodosporidium toruloides IFO0880)
MPRSSLAGPAPLAARSDYFDSLAELAQYASKPRDPLARRSAPPVPFASLADSRRQAEQRN
RLVVCHDYKGGYCEREDERGYTFQWFHLCDTFIYFSHHRVSCPPSGWIRSAHVNGTKILG
TLIFEWDAGREDIVELVAPTSPTAKRFSSFSTRYADLLVDVAVERGFDGWLVNVEVDLGS
GSAKEGAKEHTRVLLDWLVYFQAALKKRIPHAEVVWYDSVTTEGKLAWQNCVNELNRPFF
LACDSIFLNYWWRSEQLAATSQEIQQTCPGRVADVCVGIDVFGRGTLAGGGFESWRAAHA
ICTATQASQTPSEAGFSVALFAPGWTVEAESLGHSLATPNSFAKWAADDAYLWSHGSPTP
SVPIEAARQERERREQRGVLRARQLAASLAPSASPLPISMRIPDPPTFDYEAPLDPLPGS
ELGVSHRPLASFFSPRPIPCPDFRFYTNFCAGSGHRMFVSGREVDRSDTGWTDVAFSYPF
PSLLFRTPELDGVNAAATEEHAWEGSRAVEVKLEDAHDNLLVPFFPLALPPLPAGIELEA
WAIWKSIDGLDTTVAPVISDDSASLSRLSVDTASTGSKDWLRTTVMFRCADGTPTNATYT
LSVRFSYGVILVGAMGVRPVDPASARPVLASLEYLAAESLLRWQIDYVTASASTASPAPL
AGTPFFQHFHLFVRDKAGDKRYLGTTFETEFAIARQCIEEAEAVIIQGVDEAGRLEQLEQ
RAAQLLQ