Protein Info for mRNA_5802 in Rhodosporidium toruloides IFO0880

Name: 14170
Annotation: K07441 ALG14 beta-1,4-N-acetylglucosaminyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 323 transmembrane" amino acids 85 to 108 (24 residues), see Phobius details amino acids 127 to 145 (19 residues), see Phobius details amino acids 197 to 221 (25 residues), see Phobius details amino acids 233 to 254 (22 residues), see Phobius details PF08660: Alg14" amino acids 128 to 302 (175 residues), 190.2 bits, see alignment E=1.5e-60

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (323 amino acids)

>mRNA_5802 K07441 ALG14 beta-1,4-N-acetylglucosaminyltransferase (Rhodosporidium toruloides IFO0880)
MAGGKEGVDQAQAPLASNARRRCERWYSLALTVIEAGYCIQGPANAASTGRLAVLEDLDG
VRILLTPLPSTPRHAMLAPLDWRGLRLATASLVLVTALTAARLLQVVVRIHTPSRPPHRR
QTDEGTLAVFLGSGGHTAEMMRLVAHLDWRRFSRRTWIISSGDTLSEAKALALEKQIGTG
EFRILRIPRARRVHQSYLTSPFTTLYSLAYCLWHIAIAPLLDSRRRRVFADVVLLNGPGS
CVPITCAAFLPRLLSLPSPALIYVESLARTRRLSLSAKLVRPFVDRFFVQWDSLRDELVK
KEKAKGLGRWRLKARVECQGWLV