Protein Info for mRNA_5827 in Rhodosporidium toruloides IFO0880

Name: 14195
Annotation: K04518 pheA2 prephenate dehydratase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 218 PF00800: PDT" amino acids 20 to 196 (177 residues), 184.2 bits, see alignment E=1.1e-58

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (218 amino acids)

>mRNA_5827 K04518 pheA2 prephenate dehydratase (Rhodosporidium toruloides IFO0880)
MATSAASTAVNGMHPAPPRVAFLGPIGTYTHQATSEFFGACELAPQARIADVFTAVSSGS
ASYGVVPIENSSFGPVAESTEQLRTTELSVRGMLALRIGHALMASRKAEKGKLKRVFSHE
QAIGQCRRYLDERYPDIEIIPVNSTAQAAERAVDDLEALAICSLKCAEVYDLDVVDTDIQ
DAGEANTTRFIVLSHSSVPLPSRYPISRPATVDTASEQ