Protein Info for mRNA_5901 in Rhodosporidium toruloides IFO0880

Name: 14269
Annotation: K07204 RAPTOR regulatory associated protein of mTOR

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1509 transmembrane" amino acids 382 to 391 (10 residues), see Phobius details amino acids 552 to 573 (22 residues), see Phobius details PF14538: Raptor_N" amino acids 114 to 264 (151 residues), 206.2 bits, see alignment E=2.4e-65

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1509 amino acids)

>mRNA_5901 K07204 RAPTOR regulatory associated protein of mTOR (Rhodosporidium toruloides IFO0880)
MPRLPEQQVPEAAAEYSDVSESDEYDEEEEQASALSNSGYGQGYGEWDEAVDIDSNMRHG
FAEAYSSEEYLQALEKNYFLYWTDTRHERVGLPKPPSSDPADQKIDWRNRDRIRTASAVL
VVCLRIGYDPPDIIKTDPCAKLECWVDPFAIAKDKAMERIGKNLQQQFENLAAMPKTRYK
QYLDPPIEDAKKFCTGARKTAKNERTLFYYNGHGVPKPTPSGEIWMFNRQYTQYIPVSLA
EIIGWIGSPAIYVWDCSAAGNIVSKVQEFSTKRDADLTREAAAAAAQGVGPDGQPVNAGP
QIPNVPFRDTIQLAACLSHETLPMNPDLPADLFTCCLTSPIEIALRFFLLRNPLKTNLDL
DMLLKIPGKLNDRRTPLGELMWIFTAVTDTIAWNTLPRDLFQKLFRHDLVVAALFRGFLL
AERIMRFYECTPISVPALPQTHNHPLWDSWDLAVDMCLAQLPTLLEHEQRWLDSLPPQPP
TLPDQPPPPLPPQPPSPYIHSTFFAEQLTAFEIWLEQGTVAKRRHPEQLPVVLQVLLSQA
HRLKALILLCKFLDLGPWAVNVALSIGIFAYVLRLLQAPAVELKPVLIYIWARILAVYEG
CKEDLLKQAYPAARSVDQAPFTYFVSVLHPSSTQQLHLPNVSEHRAMCAFILAVCCRDFK
VGQVACLRVNVFESCLVHLRDEDPLLRQWAILCIAMMWDDFEEAKGMGVKSRVHEVFCNL
LHTDPVPEVRAAVMYALGTLLGATGSSNPAKKFGRSIVCSGPASGLSAGEQTDVELGVAM
ATLKSSSDGSPPVRRELVVLLSSIVNEHQGQFIVAAYRAIADRVNRASAGDAPSSGIEGR
TASIAASLTAAAESNEGPSNPAFQATMFSCMYQTLTQLTADPQLEIAELAQQVMDYIFDI
LFSSPLGPPARALLNSVSPDVSKPRVPPPPAPASIQREQIYARDPLPKTNGHSTPTTTGL
GGTIKRSATALKSLAHLALEGGPTPAHSAAPTPPPGHPPSALRLNGKPSAPSTPASGASS
ISSSASTDSLRHLQARVGKPAIKSRPSSQPDSSQVDSIVAQLIQQDEERLKKRRQAPNVA
TAAEESPDQVFPLKGTFFDFALEYYKEPQMRATEADEPGSVLHNERVWRRQRNEAVIIKT
QPMKGPACRTRWDEQIGYIAGDAVPTRIMFHQFEPHIISSDDKGNITVFDWEKNYRVNYF
ANGTPQNVPITTLRLVNEDDVALLLTASADGDIRLFRSYESPDQVKLISAFQGIAEELPR
SSSEQDAGLVVEWQQGRGQLLMGGNVKYIRVWDATRETVVQDLPTRANSCLTSMTCDQVA
GNIVVAGFGDGALRVYDRRLPPRDNMVRRYTGFHNAWVQNVHMQRGGNRELATADLGGQV
CLWDIRLTEPIASLQAHQGNLTQMTVHEHAPIFATSSAYNVVKLWNMDDLSEPFSKFRNT
SGGLTSSKGSSMTFLAFHPHHMMLGCASSDGLRPGSSTEHVGHINLFRMQDYSKTLNSVS
TTLSYSAYF