Protein Info for mRNA_6056 in Rhodosporidium toruloides IFO0880

Name: 14424
Annotation: K13996 EPS1 protein disulfide-isomerase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 747 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details transmembrane" amino acids 701 to 720 (20 residues), see Phobius details PF00085: Thioredoxin" amino acids 29 to 129 (101 residues), 79 bits, see alignment E=4.9e-26 amino acids 327 to 410 (84 residues), 72.6 bits, see alignment E=4.8e-24

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (747 amino acids)

>mRNA_6056 K13996 EPS1 protein disulfide-isomerase (Rhodosporidium toruloides IFO0880)
MRPLTTLLALATSALLSSAAPISTAGDSLTEETWDAHVGKGTWLVEHYSPYCSHCKAFAP
KWQELVDTFGDAAASHDFHFAQVDCAANGDLCHSHDVKYYPSIYLYEGGTFKQEYEGRRT
LEELAKFAEEHYPVKAEKLAKEKEEQEQSAKEGTVEEKWDKEEAELDAQVGMGERKKLVS
GERRVAGAGKARLPTEAEEEKAAGRPKLPVMRIAGDTKAEEEKEDSATQAEDLKPLLEKA
EADEAEYRSPLLVTSDDPAEAVSTPTTSTQTPPASTTTAAKFSPPAFVAQRPASPESKRS
NDWPAIDGTVLTLKADEVGFLKEPDAPPAFVKFYAPWCSHCKQIAPKWKDLAAAVAPSGI
RIYEMDCDANENKKACRKEGVKAYPTLQFYNKGASVEYMGKRSVDAFRDFALKAMSATSI
KPIANEYELRHAAKEDEVFVLFLHGQDTKKDDMDVALGAAKSLMGSSPVYSSTSPDLFSL
FSVPHDQPTFISFKDHSTEPYDTFALPLSTPSHPLPIRKRLDMTRFWLRAAKLPTVSELN
AATFNDLLPTDGNPPLVGLAVLSKKGLGDDFDATLRSFERVAKGWAERRRSLSAEKKGRD
VLWAWVDGDKWAGWARSMYDVKMGAKDGPRLVVTDPKALNYWSTTLAGEPLGVDSSAVYE
LIERGIYTGRTKANSSRQFLERFAFSTVDRFTSFYNWSTSHPLLAFLAVAASWIVIWQLL
KKAITPPPVPSVPGPARGWSANGPKRE