Protein Info for mRNA_6069 in Rhodosporidium toruloides IFO0880

Name: 14437
Annotation: KOG0198 MEKK and related serine/threonine protein kinases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1269 transmembrane" amino acids 744 to 761 (18 residues), see Phobius details amino acids 773 to 792 (20 residues), see Phobius details PF07714: Pkinase_Tyr" amino acids 14 to 258 (245 residues), 163.1 bits, see alignment E=8.3e-52 PF00069: Pkinase" amino acids 14 to 263 (250 residues), 237.4 bits, see alignment E=1.9e-74

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1269 amino acids)

>mRNA_6069 KOG0198 MEKK and related serine/threonine protein kinases (Rhodosporidium toruloides IFO0880)
MADPRPPPSLPDFKLAEKLGQGAFGSVYKALNWTTGETCAVKQIDLSHIPESELPDIMSE
IDLLKNLHHPNIVQYRGYARTSTSLYIILEYCENGSLSAIIKKFGRIPESLVGLYTLQVL
QGLQYLHDQGVIHRDIKGSNILATKEGSIKLADFGVATRVGGPIDSAVVGSPYWMAPEVV
DQTGATPASDIWSLGALVVELITGKPPYHFLDPMPALFRIVNDDCPPLPEGASAVVRDFL
GQCFQKDANLRVGARKLLRHPWMVAAKRQADQQRKVSEAREAVVRGAEAQGVRRAPGARA
RPTTVYEEEVQKVQEWNEALKAAPTALRAARSSAPATSNDENRRPTHLRTLSQVVRRPSA
ELASALSSAPAPLPELSDPPLASTSRRNSIPLSVIQPVSAARAVEAQAREEQLDDNWDSD
FEDGISISKIAALEGSSSSSASESEGEGGKKGVQDEDEEVEGGGSVTIRPGRLNAATIRA
GGSGGTKKAGQAMPPIVEDYSDLVGDDEADALDLGVSRFKAKNKPAIRLLRPSDIANFAV
PAPSTPPSPRKPSTPTQPGFRSSTPSASGSSIFDEYGEQDVDDYSDLFGRTVGGDSQTSL
GSLKLNTRLSNKSWLGEEDSDEEDPFAAVEAEELDPHGAIAFLDNSEADLAANLARDHLA
RQCALVEELVDVVASTEHPDDFETREAALQLTGLLEESCDACAHFVKSHGMLVVLEALRI
ARSRDVLSILLRIVNLIVGSDPGVLEKIALVGGCPVVMAFSSKRYSREIRLEAALFIGAM
CRTSLLTLQMFVSCQGLRSLVEMLDENYQEGKDLVWMAVDGISRVFEMQGPIPRNDFCRI
LTQEAVLEPLSNALLSVCGDTDDLAESAKAKIVHILLLFAQSDHKVKEAIAKRGILLRLV
RAADLLEPDLLAVLLKTVKNVSMLPSALEVLQNAGAIEMLVSMLAKTYRGRVGAEIQNHA
VNALFNICRLSKSRQEEAARIGAIPLLQAIVRDNSPLKQFALPILCDFAHAGKACRHLLW
KHDGVSFYLQLLKDTFWVNSALEALLVWLQDESVRVEACLLEQSSLDDLVRLFCKEKGTT
FENLLEPLHKMLRASLTLASRLAVQSGFLKRAVERLERASKAVVRLNLLRIIKTVFDSLA
DRRDRDKAIQILAAPISRLAQEDKAVLSRQLAKTLAADFANTKEESKRSLAQRAMRRAAS
EGGGSLSAMPDTSSRRHRPALSSANYSSPATSGRDSPTPASPRISSARQAPLLPSSSASP
PARRPSVRR