Protein Info for mRNA_6089 in Rhodosporidium toruloides IFO0880

Name: 14457
Annotation: KOG3098 Uncharacterized conserved protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 473 signal peptide" amino acids 1 to 15 (15 residues), see Phobius details transmembrane" amino acids 28 to 49 (22 residues), see Phobius details amino acids 61 to 87 (27 residues), see Phobius details amino acids 92 to 111 (20 residues), see Phobius details amino acids 118 to 143 (26 residues), see Phobius details amino acids 155 to 177 (23 residues), see Phobius details amino acids 190 to 209 (20 residues), see Phobius details amino acids 242 to 262 (21 residues), see Phobius details amino acids 278 to 298 (21 residues), see Phobius details amino acids 310 to 332 (23 residues), see Phobius details amino acids 352 to 376 (25 residues), see Phobius details amino acids 413 to 434 (22 residues), see Phobius details PF05978: UNC-93" amino acids 66 to 136 (71 residues), 31 bits, see alignment E=1e-11

Best Hits

KEGG orthology group: None (inferred from 68% identity to afm:AFUA_3G15000)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (473 amino acids)

>mRNA_6089 KOG3098 Uncharacterized conserved protein (Rhodosporidium toruloides IFO0880)
MTTAALSSIQAATPERSLALRPRWYFSTWWASLVLGLVNFCAPGIWGAMNSLGAGGLATP
FTANLANALTFGLMVVTAFLTSAIVRLVGVKWTLAFGAAGYAPYAAGLYCNSLYGNQWFL
LLGAALCGISAGTFWAIEAAIALSYPEPYNQGRFLGLWLSFRVGGQILGGAINLGLNANR
STAGAVNSKVYIIFIVLQAIGPFVAFLLPAPRKVQRTDGLPVRLFIDNPLLHELKATAKL
FFSKRFLLIVPLITQAVFPESFNGTYLTLHFSTRSRALGSFLSAIVAIVCGNLLGLWLDR
TSVSLKRRARIAFFVVLGLQGAWWIWSTVIQVEFNRTGRVYDWADKGFGRGFALYLFLVA
GFQLNYLFLYFVVGTLVTEPADIVRIGGLLRATESAAQAVSYGLNSLSSFTTVGASSLNF
GLWAFSLLPAWLVIRKIGTEYLGRGVKETEEAEVKGLESGAASLESEKSSIVG