Protein Info for mRNA_6140 in Rhodosporidium toruloides IFO0880

Name: 14508
Annotation: K20463 OSBPL3_6_7, ORP3_6_7 oxysterol-binding protein-related protein 3/6/7

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 848 PF15409: PH_8" amino acids 46 to 129 (84 residues), 66.3 bits, see alignment E=2.5e-22 PF01237: Oxysterol_BP" amino acids 489 to 834 (346 residues), 384.7 bits, see alignment E=4.3e-119

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (848 amino acids)

>mRNA_6140 K20463 OSBPL3_6_7, ORP3_6_7 oxysterol-binding protein-related protein 3/6/7 (Rhodosporidium toruloides IFO0880)
MAGSQLRPRRSSLAPPSSSSPSPSPSANSAEEAGAGAGGEEVVIEGYMLKKKRKALQGFG
RRYFRLSSSGALSYSFNPSSPLRDSIFVSLAFISASRKQRTLHIDGGNTVYHCKALTLED
FDRWADALKGFINLAQQDHHHSHHHHSQQPSLPVPPQELEDGGFKGGNVAAVQGGKKGAV
VLPPPPGGMGGAGGVGGGTESGEVERVRRALGAMAQPMADIEALARELRQSSSPPPPPAQ
QTVTTSQLSVSPGSLSPAPPSTGSGSGSKFRFLGKRSNSTSQPGPKSPISEEPCYFDAKS
TPSGGGTQDLLLRQLQTAISALRQSHADLSTAISSLSSHPPRAGSPVYASRSHPTRASSR
ASFSSFFSVENGSEDWFDAVPGEFVLEEEERRRGVSQGDEEEEDEDDEEEEAKTEERSGS
SGGEASTIVEDEEDDESGDEEDDDAETTRAPSPAGEGGAGSSVAKGLQEGTQVQRRKQLP
SPVAGDEFSMLSMLRKNVGKDLSTISFPVTMNEPLSALQRLAEELEYSELLDRAAAAKDP
VERLTLVAVFAISGTAGNKFRSSRKPFNPLLGETYECIRPDKGFQFVSEKVSHHPPVLAF
HSDAPQRGWQVFGHIAPSQKFWGRSMEVFVHGDYCIRFSDNSETFHIRKPSSFVRNLVAG
TKYLEVVGDLVVTTDSSSAQATISFKEGSAWGGSSTRNKIDGKVVDADGKTAVELVGRWD
DAVDKKEGKNNFTRLWQIAEFPPNPERYYGFSSFAVTLNETTSLEEGLVAPTDSRLRPDQ
LAFERGEVDEAERLKAQVEEKQRAKRKEGKVGEPRWFSKAAGGEGWEYTGKYFEARDKKA
FEDPDIFC