Protein Info for mRNA_6144 in Rhodosporidium toruloides IFO0880

Name: 14512
Annotation: KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 PF07716: bZIP_2" amino acids 334 to 390 (57 residues), 31.9 bits, see alignment 1.2e-11 PF00170: bZIP_1" amino acids 337 to 396 (60 residues), 30.3 bits, see alignment 3.6e-11

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (600 amino acids)

>mRNA_6144 KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors (Rhodosporidium toruloides IFO0880)
MPSFGFNLDTPSKFLGSGSPNPWSFGTGLTPSLFSSLNSRGFTPSITELHGEPNPFELTL
SGPSSKRHSVASGMLGGAKDGDGEMDFGGSSLATTLMGGRKRAMSSPAVGTPGGTNSFFA
MHQPSQLVPGAFADLAIKPSKRPRIDSTTSSGIESSDRIFSSNERDSDESPASSVVLNSP
ETKSMLPSIREDKTPISPPADIPVSMGLNVAGPSNIGIGPPTTASLLSQLEKQRSAMIAS
GTAYSQSNPLPIKPLDIAVKSEAVDDFVARPPVTRGQSKKGKAPVASGSTTAAVSEDGTP
APAPKRKGGRKKSAAAAAKTAAEKKEGQEPIEDDDEDSVKRKQFLERNRIAACKSRQKKK
EKTRQLEQFAAELCNRNHVLQQTALALRNEAVALRQLMQAHNGCSCEHAQGYIARDSAGG
GIATIDQLAGHTLHLDYTAPPAMGTEDDCYSFLDRGEPPPGPNFQTNKGAYAAPANAGPA
IPVVSKPGPSPKQSPVRQSSTRSNGMSTRSSGVVATVAPEATNDVLAAGVDVAALHASSY
LGMAVPPTVEAAAQAGFVDNAALQRMRANSAPPTTLGWDGAAPDGDYFTPKTRPSRAVVA