Protein Info for mRNA_6154 in Rhodosporidium toruloides IFO0880

Name: 14522
Annotation: K16667 PTPRG receptor-type tyrosine-protein phosphatase gamma

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1132 PF00102: Y_phosphatase" amino acids 688 to 782 (95 residues), 104.3 bits, see alignment E=4e-34 amino acids 851 to 962 (112 residues), 57.8 bits, see alignment E=6.4e-20

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1132 amino acids)

>mRNA_6154 K16667 PTPRG receptor-type tyrosine-protein phosphatase gamma (Rhodosporidium toruloides IFO0880)
MPGHTGPKPPHAMLNRPRLSPKSPNEIHREGYFVPPTPAAADRPQHAWSPFFGGQQGGDA
PLGRVDENGEVARAGYDAGVGAGGESALGGAGAAGHASASAGTGQANEAPSNSPWSTTAP
PSFTLSPTSTAFNAKFSHALRVPSSSNIPQTPLYPPPSSPFIPENAASTRPAAASSSHPA
SAVPPTPGPSTTSGLSFPPSSSANSPFKLPTSLAFAGRKPSGAAARPSSLSSSQRTASAL
PIPITSQRYTLYTPAQIFTLLHSASNADPKTPPILVLDIRTHTAFVAERLAGSINVCVPS
TLLRRPAFGIDRVADSLPPSDQEVFERWNSCGVILVLDQESTSLVEGGGPASLLAKFDKA
GFEGKLGWVKGGWYAVRTQLRGLKEEEQEKLVEVGSSATVAQSPTTASAPVSAHSTPFGA
PGPAGAQTSALDAPTSLVGGDSAHSSTYPPINSKKHGRPVLQVRDLPASAFQLASTSAFR
HSSNETSRSTSRAGPEVISPSTSGGSLSSVGSVRPNMGKRRKSGNEGFLGELPSAITSGG
RPSFDADFRRAIASSRDNSQVRTSANPFFDNIRQNSEALSLERSLANLAPIDLPPVSPSL
IPSLPSFLRTYLSLSPMSRADRLARQFYELEFAERERLEGTFKWHSRQSVVGASRAAEEE
DREAETEEDQEKRWEKFGISAGVELGNLNRFKNIFPYEHARVRLQYHSPSATDYVNASYL
SLRNSSKRFIASQGPLPTTFRDFWQMCDQENVGVIIMLTNLQEGGRDKCGRYWASEHEGE
WDIQLEGDLEREEADRLKALEAKGGAESTGGLLGPGGAKGPGAGGGGFFSVFDAKEAKKE
EKKAKPKNFEEATLRSTITVRRRRQSRNSSSSSTPPPPRKIRHIQYRAWPDFDIPAEPAD
VVSLVNEVEAAQRAYMRETGWDPKEHGGLEPPILAHCSAGVGRTGVFIMVSSLLAKLRQD
HEAATQSDVARTDDSMDIDPPSAAAPPSRPPLAERLSDPETSLLSTGLSLSSLNGPAHSP
SPTPMHPSLTLPRLESRISSTSTSTTSSATLAPPIPTSAGSATPASPSPVQPALPPLDVP
ALAQQDPIFAGVNELREQRMSMVANYRQYVSVLECVLEGAVRLFSQDSAKSS