Protein Info for mRNA_6172 in Rhodosporidium toruloides IFO0880

Name: 14540
Annotation: K02685 PRI2 DNA primase large subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF04104: DNA_primase_lrg
  • amino acids 204 to 487 (284 residues), 287.5 bits, E=5.1e-90

Best Hits

KEGG orthology group: K02685, DNA primase large subunit [EC: 2.7.7.-] (inferred from 56% identity to uma:UM03852.1)

Predicted SEED Role

"DNA primase large subunit (EC 2.7.7.-)" in subsystem DNA replication, archaeal (EC 2.7.7.-)

KEGG Metabolic Maps

• Biosynthesis of siderophore group nonribosomal peptides
• Lipopolysaccharide biosynthesis
• Nucleotide sugars metabolism

Isozymes

Compare fitness of predicted isozymes for: 2.7.7.-

Use Curated BLAST to search for 2.7.7.-

Protein Sequence (535 amino acids)

>mRNA_6172 K02685 PRI2 DNA primase large subunit (Rhodosporidium toruloides IFO0880)
MYAANRGAPSSSRSLGAPQTSLSSSASTSASRLEVPIAPRSGKYPSRLNLYERPPLEELT
LEEFEVWAIDRLRLLADIESAQARNRSFKDIKEIVEKRAQEYLPLHPDSSKTADIDKERK
KDHYSHFILRLAFCRSEELRQRFLKAEKELFHIRWDSDDPSERRRFVDSLNFGWEVVSEE
EKQALWPQLSAASGLTGGSYSESFFKVDWTKVTDLVARRNVFLKGGKAYVPSSQEYSLVA
DEFGARLARGLELTAKALPRLDEDTRLIPILSHLSMGFMAGITSDYTFASTADGEAITAE
MIPELSVQSFPLCMRNMQDVLKASRHLKHEGRQQYGLFLKGIGLSVEEALAFWRKSFSTI
TDDKFNKEYRYNIRHNYGLEGSRKNYTPKSCTAIITGPVPGPGQAHGCPFRHSSDQSLTS
LLQSTLGSALSSSDLKEILAATKAGHYHVACTRVFEIQHAKLPGGKGVEKGEGVGGGDSV
DHPNRYFDASRKVIREAKDSVKKEEDGAEGADVKPVVSGRKMVGVKKEEAMDVDP