Protein Info for mRNA_6327 in Rhodosporidium toruloides IFO0880

Name: 14695
Annotation: K13124 MORG1 mitogen-activated protein kinase organizer 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 306 PF00400: WD40" amino acids 11 to 45 (35 residues), 12.4 bits, see alignment 2.6e-05 amino acids 53 to 89 (37 residues), 23.8 bits, see alignment 6.2e-09 amino acids 94 to 131 (38 residues), 33.5 bits, see alignment 5.6e-12 amino acids 266 to 299 (34 residues), 17 bits, see alignment 8.8e-07

Best Hits

Swiss-Prot: 45% identical to WDR83_XENTR: WD repeat domain-containing protein 83 (wdr83) from Xenopus tropicalis

KEGG orthology group: K13124, mitogen-activated protein kinase organizer 1 (inferred from 54% identity to scm:SCHCODRAFT_16823)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (306 amino acids)

>mRNA_6327 K13124 MORG1 mitogen-activated protein kinase organizer 1 (Rhodosporidium toruloides IFO0880)
MPPPSPAPSSLLFTISSHKGAVHTAVYNAGSSYILSGGADRQIKLTNAKSGMEVKTYGGH
GYEVLGIACSHDNSRFASCGGDRSVFLWDVTSGDIVRRLSGHMGKVNAVAWNADSSVLAS
GSFDTSVRLWDIKSQNRAPLQILEGARDSITSIRIHDHLICTGSVDGYVRTYDLRMGQMQ
ADFFDQPVTSLTFTVDAFLLLVSTLDSTHRLLDLQHGTVVQSFTGHKNTSYRSQSCLGRK
EETVVCGDEEGKVWTWDLEAGTPLGKPFKAHEKAILWTAHHPKEQQLVTASSDGTVKVWG
VVGSGR