Protein Info for mRNA_6445 in Rhodosporidium toruloides IFO0880

Name: 14813
Annotation: KOG2896 UV radiation resistance associated protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1064 PF10186: Atg14" amino acids 572 to 833 (262 residues), 79.1 bits, see alignment E=1.7e-26

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1064 amino acids)

>mRNA_6445 KOG2896 UV radiation resistance associated protein (Rhodosporidium toruloides IFO0880)
MPLTRSDSSQSAWVLPQDDEGDFPEQRRLRHLSGILLRNLSLDPARDGLAASLAGPGDFT
SLNDPLPTSLVGKLASNSYDAGPPSDDASQLSLPSPRKARRRAGSTASWSGTLAATREED
AKLGLDAKLPARIRPKRSSSVGTLLGKAIPIDEEEGAGPAAATSTPLTRARSASRASVGS
AGSGSTIRQAPRLPPSRPEGDHLAKEKPPPPASSLFALKEKQRQEEAMKRRLVDSFVTLE
FVPAQVGALQHERPVLGSRRRSGSVASVGMRRSGSGNSLHDSKSSPRKSMRRRTISSSLL
APLPPSAASSSSPRQPQPSSRPFFVSPISPSAMHADILIDHDSFILPDSLPSSFPDDSGA
QSWQGLSESRLRIKVFARSATSRSDSKGKGKEGKEGEDGWRVLTEWDVELDGLTSLGRDP
TTFPPLPPNTLVFALSTSPSDPFASPSSSSSNDLEYFTAPLTLLYRSRRRRLVRRNSIST
LHPRAWSEDEADASDSDLSSCSSDEDGGGNMSDPGVGDGSGTIRTRPRSGNIRSLRSRLI
KAEEERRKRAAVMERSRRETKMVRAADWEEMRRLWEAEWDLRDVRSEQKEVRRRIDEVLE
QGWAEQERERAELQDRADDLDNVKEAVRDELLDSQAEIVRRREAIAARRERLRRVKELDE
QSRNNLRAHATALDNTSRALDKLNESARIRRTKLITLLSHIFPIEPVEPTSTKQPQPDLL
FSIVGLPLPNSSFPSSYTDDLLSSALGYAAQVTQLLAAYLGVPLCYPIQCRGSRSVVFDE
ISMMKGPRAFPLYGKGVDQYRFDYGVFLLNKNIEQLMYSQHLIVLDLRNTLPNLKSLILS
LSYDPSHADYRNSTLLPSELFVGIEDEEEERAASPTAAAGAAPPIEDAGAVDEGDDERGR
DGASSRMTRSSSNASTIRASSMSRQSNGADPDSPNSPTPSVKSTNGDAAGSDSSSLVNGH
SSGRTTPTNRRRKDTEKRLIPPRDNSSAHPISLSVKSTRPASIKAARSRTSSHASNSSGY
GAKIRDGLWSAVAGGSGSRERREGRKGRRSAVEMDGGEEEGGVA