Protein Info for mRNA_6458 in Rhodosporidium toruloides IFO0880

Name: 14826
Annotation: K01193 INV, sacA beta-fructofuranosidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 666 PF00251: Glyco_hydro_32N" amino acids 3 to 198 (196 residues), 180.4 bits, see alignment E=6.9e-57 amino acids 325 to 417 (93 residues), 57.9 bits, see alignment E=1.3e-19 PF08244: Glyco_hydro_32C" amino acids 458 to 588 (131 residues), 24.4 bits, see alignment E=2.7e-09

Best Hits

Predicted SEED Role

"Sucrose-6-phosphate hydrolase (EC 3.2.1.B3)" (EC 3.2.1.B3)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.B3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (666 amino acids)

>mRNA_6458 K01193 INV, sacA beta-fructofuranosidase (Rhodosporidium toruloides IFO0880)
MVMNDVNGAFRAPNGTWHLYYQYNPTDVVAGNQHWGHATSDDMYHWVNQPIALFPPNSTA
AVFSGSAVTDPNNTSGFFPNNNASNPGVVAIYTLNTPEKQTQEIAYSTDGGYSFTPYSGN
PVIDIGSNQFRDPKVIWYNDRWVMTVAHAQEMFIAIYTSQNLKQWTEVSRFTRHGFTQLQ
YECPGLQRVPIRRRNATSSSGSSGSSGGSSNSSMSSSSSSAPSSPVSTASASLARRQAST
LVSGASSLFSGASSVVRPSASSAMSSGSRASSTGSASSSSMISSGSSMASASSTASSAMP
SSTSTGGAAGGSSGGNSSSNSSSQDFAWVMWISINPGAPLGGSITQYFVGDFNGTHFTPF
DDSVKLADFGKDNYAGQFFYNTGDQAVSMAWASNWQYTDFVPTANELWRSADSLPRNNYL
VEADRIGWVLASEPYNISAVRNSSILPGGNETTSLVNQTVSADFSNITSGAIYFSVNITL
PSNVTLGDYASLNMTLTSASSNENLTAGYFFGGPNSNSTWIDRSGTRGYTGNPFFTSQFS
QTAPTVAYNIEGVFDRSLFELFIDEGTYAATVDVYSQQPLTKIALATGDMPEGAQVQAAI
WGLSSVWTNSTSGGNSTSGGNSTNSAASSSMMSSTSSMMSSSSSMMSSMSSTASAASTSA
SASTTA