Protein Info for mRNA_6509 in Rhodosporidium toruloides IFO0880

Name: 14877
Annotation: K12494 PSD PH and SEC7 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1509 PF01369: Sec7" amino acids 698 to 845 (148 residues), 104.5 bits, see alignment E=8.6e-34 PF15410: PH_9" amino acids 1129 to 1252 (124 residues), 93.5 bits, see alignment E=1.9e-30 PF00169: PH" amino acids 1130 to 1246 (117 residues), 27.8 bits, see alignment 4.8e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1509 amino acids)

>mRNA_6509 K12494 PSD PH and SEC7 domain-containing protein (Rhodosporidium toruloides IFO0880)
MLQAAAQRLTRSSPSQPASSSAPLEPTERQQRRLSRISPSEFDSVLTSGETVKLNTDTGG
LASDSPEALAPPEASPSPETPRTKVSSRRGSSKGAGEFALNGLPGLGPISSAGNSPESIR
SVRRRRDDDAVEVLDSYQWPDAGTSREKESSGNGRNDTSSDPFRQPPRNVSPERARQPLS
SVPAPANPARSESYNSVNTIGSSGANGQRGRLSISTISTGSYVHVPFPPVENKPQTATQP
QSSTSTAGFDFSPLRKRVSSSESIEGKMSIAGTMRRTSRFFRKLGGVASGSSKSTPSSPL
PQSDFFPQSAESPPLPPLPSPLTRSTAPRQNSSPRQTVIARDPRVNRRDIPQLPSTSHLP
GSPTDTSSTAMLRDDSNNSLLSVQSRSSAGSGSRRRRSLSLNSVRIDGSGAEGGLAVPQQ
PERARRPSSRNEDDRLRRELRRWRLGVDGVLGAAGSSTTPSPSSFGGSPPLASQSSPQLE
RTASNLSADARPPSPSLSLGAEQRRASVPGDTNKPLPPLTAYRSASLPTSSLAPQPSTTA
AERPSSLEGDTPEIRLFVPSRSGSVSSAVTVNPASLARGSLTRGSFSSTTSTEDGTGIGL
GLATITENLHSRDNTLVSPAAQPAITPTRDTFPTVNDSPARLSPSSAPATVSNRSKGDRG
SIVALGSSLPASLAASSVSLSSSMGPGGSRSKSRAAKAAEAAAEEAMTDEEVEEKARGLA
TRAWDEDETFLEKRKIAEWLGTAGRLRTAVLRLYINHFDFSGLRLDLAFRKLCGKLYLKA
ETQQVDRILEQFSRRYFEDNPSSPYASPDVVHAVSYSLLLLNTDLHVVDSTTRMSRQQFI
RNTLEAINAQTGSPDPNVALATPPVLIDTPPAFPDANAPNGLGARPSTADTVTGGADSLA
AKHSPAPASIPLPASPASSRPATANSLDRSTKTAINIPHRSESTATVNSTQSNRTPDASL
QTVLKDMYNAVRAQPIYQTSVDNASHLNLPEHGGRPSLSLTPSNSPYATWSSGVNRSASR
RSSQSIISGVSSMAYKRSSIRGIGSFLGASSLELVRSSSPTSSATSLSDERWNTAYGPPS
QHHAVPTIGFANSLSNTIIREQREDDNASEASTIEVTDEELALLGAPWAKEGLLQRKHYW
EMTGKRAKDKSWSQVFVVISAGELKMFRFDGSGGSMRGGAGVGGGDWTASASNAGSISLI
HALCSSMPPPGYSRDRPHCFVLTMPNGGSHFFQAGTPDLVAEWVSTCNYWAARLSKEPLP
GGVSNMEYGWNRVDRSTDDDDREEIASIRSGHSRISYAGSAFHSATSTTNANDRIHINEW
KAPEVPLVPSNLPEEAQLEALKRHAALLRKELLEHNTIRTSMLRLYSPRSSNASKAQANW
ERKSKHLLAENVKYNTYIDALTSAIKLRALQRGKKEVEAMLESADADADDEDELIASLSP
SDGPTSPAVTATSAPPSPEITFSPAISEPLPEATSRRQSRYDSASQMSDATSRTEFFDSH
GDSPPPSTP