Protein Info for mRNA_6521 in Rhodosporidium toruloides IFO0880

Name: 14889
Annotation: K14788 NOL10, ENP2 ribosome biogenesis protein ENP2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 836 PF08159: NUC153" amino acids 574 to 602 (29 residues), 46.8 bits, see alignment (E = 1.1e-16)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (836 amino acids)

>mRNA_6521 K14788 NOL10, ENP2 ribosome biogenesis protein ENP2 (Rhodosporidium toruloides IFO0880)
MVVSLASTGGAAKIYCVNGGGMTSKNAAAWLEAKLTDRNKRRKRGGQGGTGGEGEIRLIQ
DFDFPEASNKIKTTRDGKYLMATGTYKPRMKVFDLEELSMKMERVTDSENVDFCILSSDW
TKTLHLQSDRSLDLHTQSASHYSVRMPRQGRTLAYHFPTCDALVGGTGAQVWRLNLEVGR
FMKPFGMEGAGEYDGGEGGGVGGGMGAPGDFVTGVNAIDINPAHQLMCFGTDTALGRGTV
ELWDPRSRSRAGILRLPYNSLLASSMSSASLKHPRLPGVDDDGALGGVAVTALSNKSDGL
NLAVGTSTGHVLLYDLRASKPYTTKDQGYGLPVKKVEWVESAPATSSDAEREGGWVASAD
EKVVKIWGKETGTNLVAINPPIPVNDLHIYPGTGLVFLANETSPMTGYYVPQLGPAPKWA
RFLDNMTEEMEDDQETLVYDDYKFVDRQELDDLNLTHLIGTDTLKPYMHGYFVDLRLYTK
ARAIANPFQYAEHRDKLIRDKLAAEQESRIRGAKKAAGAAVAGVKVNKQLARRAREAEEK
LRKREAGEEDEDDEEGRRKRKKKVQAETPSLLKDDRFADLFTNPDFEIDEASREFQLLNP
STKPNQRRDDDDEEEDDEEADDGFVSQDESEEEDASNSDSSAEGDLGFDHQRRPVEPPQR
PSKPAPSRPAAAAPAKPALPRPTLVAADDSDDETLSAARSRPLAAVDRASQTLAQRARQA
AESGSAKRSRRADEADSSAAADENDIIRGTPGGGMEMSFVPQPKSAAEVAEKKKAQKEKR
EKEKSDKARFGMGLERSRGAPQEDEQQRQLEDEEDSGRKRMRKPARSASRNKTRFL