Protein Info for mRNA_6523 in Rhodosporidium toruloides IFO0880
Name: 14891
Annotation: K14567 UTP14 U3 small nucleolar RNA-associated protein 14
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (1084 amino acids)
>mRNA_6523 K14567 UTP14 U3 small nucleolar RNA-associated protein 14 (Rhodosporidium toruloides IFO0880) MPRQGRQPKQLTGASKRAAKPATAETSSESTKSTKGKGRATPSAASGSADGGALDVYNYS ARIKRPRGDVDPLARASFGARKGKGKQQAKGAAAKGKGRAAPSDEEEDSENKQGSDDEED ESGGFRVRGNEVVEFTGVKPAGFKLGMDSDAEDGAGFLGSDDEDEEIDSDMAEDEDEEED LPVKRGDSSAGKGKARDMDIDLDEDEIDYDDEEGAGWMDLTEVLDAGGFQASDDEEEEGS DGSAVSDDDEERDEEDEDMLDDDDPSALDKLDSFVSGLDSKKRKSRDGEDEDGGKKKKRV VLQERTEAYPEGEFVAVGTSGGADGKVNLDDLLSSFSDSKNPRLASLRKSLKPLASSSSS SSSKVTTTNSHLKAAGPLSAPLPGRLQDKIDREAAYEQTKEETDKWNETVRRMKGESGLG VEGARHERLVLPLVGGEGDVHRDPNANEWSAKFQPTNELETSIQSLLTTAQMSQSDLQKQ EKAALATLDPADLAARQAELRRQRDLMYRAERKAKRVAKIKSKAYRRIHRKAKERAANGG PQMTLEDLAELDAIDGGNRVEEERARLELQRAKERATLKHSGKGGRWAKKIDGLEGLEEE RNAAIRDMVSRREELRKKIAGVDSDDAVDEFATGSEDERDSDDEEGEDVDAIRRQAFDEL AALDAKEAAAKANDPKLKGVLNMKFMRDAMARADRQVQQEADELKLRLAEMDEAGRMDED EEDDQPLAMSEQVQGNLGRMVFGPSSAAVKAAGATSSSAAEPDAAPTLSSSATTTKLSGP VSISTPSASRTTARSRPSLSNSGASVEAESNPWLALASGDSTSALSRKSNKASSGKADSS VAKSAAKADRARAKQADAREAEREDAKVEIDLAADAALAASAGRKGKKGKRGAEETPQIG GAMVTSGGDEDEAGSSDEELDEEEIDAQRGKGRAAFKQRELVKEAFANDDVVADFAEEKR KEIERDAPREEDNTLPGWGSWGGKGAKKAKNARKFITKIAGVDESARKDAGLNHVIISER KDRKAAKYMLKDLPFPYTSAAQHEHKLRTPLGPEWSTSTILRDQTLPEVLVKPGVTIRPV SRKV