Protein Info for mRNA_6549 in Rhodosporidium toruloides IFO0880

Name: 14917
Annotation: KOG0605 NDR and related serine/threonine kinases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 911 transmembrane" amino acids 679 to 697 (19 residues), see Phobius details PF00069: Pkinase" amino acids 428 to 587 (160 residues), 101.7 bits, see alignment E=4.9e-33 amino acids 653 to 746 (94 residues), 63.4 bits, see alignment E=2.3e-21 PF07714: Pkinase_Tyr" amino acids 430 to 597 (168 residues), 35.1 bits, see alignment E=9.4e-13 amino acids 661 to 732 (72 residues), 26.3 bits, see alignment E=4.5e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (911 amino acids)

>mRNA_6549 KOG0605 NDR and related serine/threonine kinases (Rhodosporidium toruloides IFO0880)
MAATHQAEGRLDELTWIPYSPPLRGSTFFVGGSGAVKLGGASRPTAGQNARQRPPLPQPP
IAFRQIPRLSPPAPASSANNEPRGPTQMPVAQTSSILVHSGFWDLLAATGSRFYSPSNLR
MTVANDIGTPARASQPQVAGAVSEQQRSTKQKKRLTVDMVGAPKNFAHLVHASDADQAQA
LLTRWGRDGQGKLGSPAWAAPIKESVRAVNRAVAVGETHYHRDAAAALHVVNGNVDSQLS
HTTVATAGHGAEGSLETGVAVEDDPLGATRLEPVSSPTIPLSRDPSSDSTVLHTPVNPTK
RFSFQAVKSIGTVRFSPTASAKPGAPFPFDGLSLPSSMPPFDLEAANFVPSLVSVEKAVA
TRVFFEDKYHALLKKPRSREVRRALLERELAKLRLSDEQKAAARQAWALSESDYLRDMRS
RVGIGSFVKLKTIGHGAFGVVSLVKEKGTGEVYAMKQLRKADMLRKGQEGHIRAERDLLA
TAATTTRWAVKLAYSFKDVDHLYLVMGYYAGGGARDVLLFHLLSLLIERDTFPEAMARFY
MAEMVLAVQETHQVLGAIHRDIKPDNWLIDAQGHLAISDFGLATDFHWAHDGAYFEQQRR
ELLYKHGIDLEDGGGRDDVARRRVSLDPPRTTNEEESPGSVFTWRDMQRRRLAFSVVGTN
NYMAIEVVRGQGYDARADWWSLGVILYEMLYGFPPFVSKSRQETRAKIHNWRQALRFPSK
PQVSREAQDLVRRLICEPEDRLGSRSTSARPNSILQNQRSGFLGDSHLGKDGAEDIKAHP
WFRGLDFSTLHLQTPPFRPQLSSPTDTKYFDDDIPPEPLPAPEIAPGVPAPDSTRDPLLK
HPVEGPRLLEVRKELAFAGWTYKKPNRQVFDPRKGLSSDVFGTANGEGTYRGRSTLRAEG
AGSSFVRSLSV