Protein Info for mRNA_6607 in Rhodosporidium toruloides IFO0880

Name: 14975
Annotation: K14572 MDN1, REA1 midasin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 500 1000 1500 2000 2500 3000 3500 4000 4500 5000 5355 transmembrane" amino acids 2728 to 2737 (10 residues), see Phobius details PF17867: AAA_lid_7" amino acids 686 to 785 (100 residues), 66.2 bits, see alignment (E = 3.9e-21) amino acids 1497 to 1591 (95 residues), 40.7 bits, see alignment (E = 3.3e-13) amino acids 2182 to 2284 (103 residues), 62.4 bits, see alignment (E = 5.8e-20) PF07728: AAA_5" amino acids 904 to 967 (64 residues), 28.3 bits, see alignment (E = 2.2e-09) amino acids 1078 to 1153 (76 residues), 29.6 bits, see alignment (E = 8.7e-10) amino acids 1348 to 1485 (138 residues), 76.5 bits, see alignment (E = 2.9e-24) amino acids 1640 to 1689 (50 residues), 30.7 bits, see alignment (E = 4e-10) amino acids 1729 to 1842 (114 residues), 59.1 bits, see alignment (E = 6.9e-19) amino acids 2031 to 2170 (140 residues), 66.3 bits, see alignment (E = 4.1e-21) amino acids 2487 to 2570 (84 residues), 32.2 bits, see alignment (E = 1.3e-10) PF17865: AAA_lid_5" amino acids 1179 to 1281 (103 residues), 93.6 bits, see alignment (E = 1e-29) PF07726: AAA_3" amino acids 1349 to 1486 (138 residues), 24.2 bits, see alignment (E = 3.6e-08) amino acids 2032 to 2171 (140 residues), 39 bits, see alignment (E = 9.6e-13) PF00004: AAA" amino acids 2032 to 2066 (35 residues), 21.4 bits, see alignment (E = 4e-07)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (5355 amino acids)

>mRNA_6607 K14572 MDN1, REA1 midasin (Rhodosporidium toruloides IFO0880)
MEGDTPDPPARSPSPAGFINLAQHTRSLANALALVKPAEQSQSITHESVLRPDAPATATE
WTPLIPAEDLSLLLSVTATVSSPDDSLNVPSHVEPAAVTAETRTQLLDTLARLALNPALT
VEVLTHFRPVAAAIIGRWFELLGFDDEGKWRNGEVGVEMAQGEMDAVDKVWKALVRAFPL
MGQEAFPFLRLLFRHPLLVRGPPLPPSSSPNYDSALVSSLLTLHSLIHHLPSLPAFAGWS
LPTHVEHLMKHHPHRGIRLVAWRIVRAWLGLFATTGERLKRQWVWRFEGADIIDEDKAAL
MPLAPPVPYPAEVAAEYTEIFGPDQASQGDADDLLPFGWGEEVVEPGQSRLVEGGLEVLV
RKRGVDPWVLPLLEDTRAREEQHRAKLVAEGIASSASQGQGIGAIEGAELGKTVVLVAGN
IAFREGLVPSITRAPAPPSATLSLTHAAAPAASPTTTAPEPFVTTSAHSALLAHLADSLQ
RRVPTLITGTPSCGKQSAISHLWNLVHASPSASDAVTAEAKRRGLVVINMADRSLDSKSL
LGSLSSAPSSSSGSNSSGAGQFTFVEGPLTRAVRQGRWTLLLNIDQAAPELLSVVKVVAE
RMSTSASVLKSDGRMYGGIGAEEQDGGVGLRVGGGEGRWVKAGEGFMLFATRSVPATSLV
PTPPPATFFASHFFDEAVLSPLNSDEVAQIVQGRYGASLDRVNGLARLLVDAWERVREAV
RDVKDSSGGGTKREIGVRDLLRWCRRVAALLPAGMNLAALEANPTLQEEVFVEARDVFLG
SLVAPPAATTTLTDPSTSTAHLPRDRFSVIARSLASSLGLSDERADWALRRRVPDVVLPT
VDTSSGLDPSTSSSAHSVKIGRVALPYAAGAASKRTASSRPYALTKPSLLLLEKLAVCLS
LSEPVLLVGETGTGKTAAIGYLAELMGKRLTALNLSNQTEAGDLVGGFRPIDEAEEARRT
ASELVNRFVELFGATFSLSRNGEYIAAVRKAFDKKRYNRLVDSFRQANRMAAKRFGADEA
APAGADDESAQAQRKRRKVDGAKAQLVERWKDFMSSVGDFEHSHVLSTGGKGKAKFVFSF
VEGPLAQAIRNGDWVLLDEVNLASSETLESLSTLLQAPDSSLVLTEKGELEPIPRHPEFR
LFACMNPATDVGKRDLPVGLRAKFSELWVPPPDEDRDALRTIVEGYIGRVAVSDRQVVAD
VAELYSAVKSLVTRAQLADGQNMPPHFSMRTLARALSFAADFAPTFGLRRALYEGFVMAF
TMLLDERSQSVVRALIDKHVVQPAKNPRSLMERVPTKPASFDSAIRIHHYWLEQGPHEPE
EPDDYILTPSVQAKVCDLARAVLTRKVPVLIQGPTSAGKTSVVEYLARRTGHRFVRINNH
EHTDIQEYVGTYVSDPHSGKLVFQEGVLVRALRRGDWIVLDELNLAPTDVLEALNRLLDD
NRELVIPETGEVVRPHPHSMLFATQNPPGLYGGRKVLSRAFRNRFLEMHFGDVPKDELKT
ILERRCRIAPSHAEKTVNVFLELQRRRQAGRVFEQKQAFATLRDLFRWGGRGPVETIQQL
AEDGYMLLAERARRADDKQTVKEVLEEVLKVKLDEATLYDFERLPKLGLPVPPQDAELVW
TSAMRRLYFLIAASLQRHEPVLLVGETGAGKTSVCQALAHALSRQLHIVGCHQNTETADL
LGGQRPLRNRASLQVGLQKEAVELLAGAGRPVAGDAELDFDDVLGQLEVYAANAKDSTAK
TLADRMRATTALFEWHDGPLVQAMRGGDLILLDEISLADDSVLERLNSVLEPSRTLVLAE
KGGHDLDDIRIVGQPGFEILATMNPGGDFGKKELSPALRNRFTEIWVPAVDNADDLLHII
GSRWGREHRQELDSFGPKMLDFARWFAQQVGQGDGLGIGLRDILAWVDFLNVAATQSSES
SLPLPDAFCQGALMTVVDGLGALPATSGLSRDGLAKLKASCWRYVEQLVPATMAPESLPL
DVVDGDGVFSIGPFGVKKGELPPAKADYTLLAPTTRLNAMRLLRALQLTKPVLLEGSPGV
GKTSLITALAAATGHPLVRINLSDQTDLMDLLGSDLPVEGGKSGEFAWKDAPFLAAMQNG
AWVLLDEMNLASQSVLEGLNSCLDHRGAVYIPELDRTFSRHPDFRIFAAQNPLGQGGGRK
GLPKSFLDRFSLVHMEELDSTDLNAIASALFPEFDAAVLSKMIAFNSQIHRETMDARHFG
MEGSPWEFNLRDVLRWLTLVRSSTGLDIHRRDPLEYVRLLYLQRFRNLADREHVSRLFTE
AFGLVVDPVEQPWPLASSQALQVGHSLLARGDTTIAIERASATLPTRRQDLQPFEALAKC
LDMGWLAILTGPRGTGKTALVRQVAALGGRRLREFTMNAEVDTLELLGSFEQADRLRDLD
FVARDAVDVLKTAATAQLTTGGSTDVYDGLAILRQARLTLATEAADLDVAAIGTDMRRCL
TGAAFDGTDILARLDAALATADAAVAAARFEWIDGPLVQAMKNGDWLLIEDANLCSPSVL
DRLNSLFETGGRLQLAERGPVNGEIQIIEPHPDFRLVMTLDPRNGELSRAMRNRGIEIAV
LSPPASVSTSTSLPAGEAYSPFTRDDFREPALSPIARLAQVGTLSALPTSQTAILQQLAS
TVSPAQLSLSQRVLRQVSLVDARSADFCLRQLQQHALVQHAVAHKNALAKQREVPFNLFA
VQPIDASLVPLAAASSSESIVRGMSALLEAFASLAVAPSVSPFASSRAASQPLRSLNVFD
KSLLASSGKLKLDEADSTIAALYPLYRQLASLISRLAGADLENMATDERDVFVGAVKAVQ
ALAQELEIVSRTQELDFSTVQHVVAWIGEALAELPSSVASSTQDVDEQLAPLRRSLTLTS
GKAMDSIWRAALPFKPASPALASVLDKLVARGKSAGEIWDRSIAMLFLEVCVVLGVPQPA
SQVPHEDEALHIVEQLLSRIPPATQQAPEDPVVALAQASNAAGLLAAELAAVAEVVQSSA
AVLPAAALVKIAQQSGAAALSDVVALHQVALWPANEHKSKPAALFATLSTWSSHLARGVS
ETSSTSPADIVRPSLLARVIALRLGETPTLGNLVTQSASLARAASLQLVAAKAESTPRQK
SLHVALLALIALVFASADDQGDHLHDGAELVHLADRITRSASAPAVDEAKQRYLAASLPT
LLGPDVDLEVTAAGFVAFARFLWHLYVPNLPLDPAVGLRAQSGFIGRQLQAMSSILSIVR
LDELAHSGNERNSKLDRVQVEVDELQQRLERAGVAPVQREGDTALLSALFTELRSFSEQI
ISDHQIDSLLGDITNAASASAVNREANLQHSVDTLLRRLDHAYAELEDVVAPVRLALTTL
KVGFALLAYTSSRKAAPPSLRPYDELLHHLTGFPTVSRTGEISTAELPLSIKAGEAPWHP
AQATLLQVAATVSSIVQNVRAQEDGIVRLTQLYERLHFLWATDRRREEEAAQEANSLYKA
KVDVQQAQTDEEVEAAEFAELFPTYDVEGGNSHPKPSKHVSRLVQPADRVLLAKLHAAVY
AEQLDGTLATATSAFERLRSSGVDTLLPRLYATLGDDLDVNSTAYRVRKLVALSQAARPR
EAVEAPHHDFYSEPDVRETSKAVPVLLAFIERLDTLVAEFPDQMVLQGLRERCQAILKLT
SEAPIALVLTNLEQLLQQTEDWEKFADRAHSISADRAALTDLIVAWRRHELTCWSRLLST
VEAKFSESVAEWWFRFYETAIRSAPGVDDSAEQTDEASQAYYRELVQLLDSFFNSCSIGQ
YGARLELLLGFANYAASLASRSDAEKELGSGAKSLARVSDLLYNVHAFYGQYAARISTHL
ATERAKIDKEVQNVVKLASWKDINVVALRASAVRSHHQLYKCVRKLRTVLQKPASDLFQA
ADVDKVTSAISLSSIPLDFAGLASVPDLTAALAQPDEPAHLAKLDQTISRLAKMSSTSLD
SLVGAAHGFAVSAFVSEIVETAKALRDEPLGPEDGRQQRVKNLIERKRRAWRDLLNELKR
IGISPSPSPKTLARLEDAGTVYSLQPSHPVLAFDDEALGADSRAVVLKADAYHVRQLAQL
PTLKAFPASHHADVRTADVQRALGHIQSGIAAAHDQRALLLEAIRAQVRLKAVSSSLENP
LVPQPSSTASQLVHELLATTSKASEALSEARDALGDFRTATVDSAHEASAPSSAIEAALA
DINRDRDALRHLDIKMGGFDPILLSSGALKTCKTAQMHLEQIVQAFAAMPQPQSLRYILS
PLVAYLSSLDVSSAEADKSPEAIKAGELRALKAAHDDLINSVLIVAQKLKAVADEGVKIV
EDEQLADGGVKVANVTYKTLLSTLRLDEVTARIEAFARQAHDCLHQASDLEPVQSLASRV
APFIRIYSDLVTRQVASLSDWHHASLKLNHVVCSILTDIASEGFCRPPEGDGQSGADADQ
ADGKTTEGTGMAEGTGEKNVSNEIEDESQVEGLQNDVPQDKREDEQNPEDGDDDAVEMNQ
DFEGDLEDRGDGAKESGDEEDEEDEDGAEPEEQVADVDPLDPSSVDEKFWGDDEPPSENK
DGKPDEVNQETSKSAGEAEMGAKEEEQAAAPKPKGEEAEEAGAEEEKKDEAKQQQGEEQQ
PDGAEGEEQDGMEDDAQGDEGEQADQETGERLDNQMPEADNLDLPDDMNLDSEEKDQDAG
DGEDDLDLPDEMDNMADEGGEGENDERPNELEELGDAKDEDAEQDEDPLAANPETQPQPD
TEDDAKVDAEAVDQSLGGADQGETGGEGEQDASAAKEDVPTSAENSRQSGAQSLPQASTE
PLADQDGGDEGETTMEDDADAAPPTAASATGTGPSKQRAAADPSADPSAQQQGPQDQSPL
EQQRSLGDSLQNWRRRLEAIGDLAQPEEQDAAAAPDPQQGGAVEYVQEGDEQEADEQALG
PASEEQVKKLEQLHIGDEVAPQDAFPEDDMAVDEPAQQPQVQSTSVQLKGSSLAESDAKA
VPASEYRSEQQAVEEDREMDDEVRADDGEHPSTTFAPPIDPEQDAAVEQAMIQWRSGDDA
NMTAEGVWRLYESLTRDLSFALTEQLRLILEPTLATRLKGDYRSGKRLNMKKIIPYIASE
FTKDKIWLRRTRPSQREYQVTIAIDDSKSMADSHSVHLAFQSLALISRALTRLEVGQVSI
SRFGEYMEVLHPFEAGVVSDEAGANVLGKFTFQQRSTDVAQLVERSLAHLAQAKESARSG
KSSLSAGDLWQLNIIISDGICQDHERLRSLLRKATEQKVQFVFVVLDSLHRQVTEGTAAS
STPSTPSAADSNQNSILHMKSVRYEVGAHGRLELKMERYLDTFPFEYWTVVRDIDGLPDT
LSQLLRQFFDSTTER