Protein Info for mRNA_6694 in Rhodosporidium toruloides IFO0880

Name: 15062
Annotation: Hypothetical Protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 797 transmembrane" amino acids 590 to 612 (23 residues), see Phobius details amino acids 694 to 711 (18 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (797 amino acids)

>mRNA_6694 Hypothetical Protein (Rhodosporidium toruloides IFO0880)
MAHTLGALTPWLHREFLSQRNAYGDRLPTTPVEEGKRVQLIRATGMTEANGETLVWAEMN
DGELWIDCCIPLSLVEQYNRRSLMVPGDVPHSKTARTFAASSSSKCIFRLLSWRFVIASP
LIPSHGQHSPRKSSTLATPSTATPRTQAPRVCLRIYSFKHYGIGEGTMQADFKPFRSFTP
DVTRVRGDGKEDAARQEREKRDKERVAWVRRLEDRVRGTSEEQARGDVSAVAEEQVAFMD
DLPRPSTTTSAPRKTTQLSPVTVIPPPPALPPAHTARPGWPTDKNAPLPRIDFGEVEALL
NRYKRKQAVQHDGPIAKDKGKGKAKAVEPEPTHVHSAAHTLPGDPTGDATGDWTSAVALL
TRKRPRASSASMSAAPPPLAPSAAAPADPPPASPRRPAAPLSASPSRRRRDAAQLAAARS
PVGRPQQLSASPRSKKDDATARREKRLVEMEVDTVKEKGAMDEDFEEDVRYEGTSTMKLL
TCIFEQQHHARRVRGLAGTDLLDEGCAWLASRWSFAPRYAAYPSAGISMTPHAGRRSSGR
PRALVQYRSLDKRSERIGSSDSNSETSDWDDDTDDPSAHLPPPATNPFSPLLLLVGVLIV
AIAGGAFVLFLYKRDQSAASDVSASPATLTQVATVPVSTVAVTTMLSQADSLSATSPSPA
SPSTTTPSASSSASASSPATPSSSSVDHSKLKALGISTFLGNLTGAIASWYHTDSTTDST
NDDDSVPGFAPSLKTMLSSFNGDATAAKKGFCGLKATVYSPKTGKQVSMIIADALDDKWV
RTPNSIDVIYGSVRPQL