Protein Info for mRNA_6697 in Rhodosporidium toruloides IFO0880

Name: 15065
Annotation: K07188 LIPE, HSL hormone-sensitive lipase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 991 transmembrane" amino acids 14 to 31 (18 residues), see Phobius details amino acids 52 to 69 (18 residues), see Phobius details amino acids 91 to 109 (19 residues), see Phobius details amino acids 115 to 132 (18 residues), see Phobius details amino acids 290 to 310 (21 residues), see Phobius details amino acids 331 to 353 (23 residues), see Phobius details PF07859: Abhydrolase_3" amino acids 217 to 346 (130 residues), 75.3 bits, see alignment E=3.3e-25 amino acids 532 to 614 (83 residues), 25.8 bits, see alignment E=4.7e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (991 amino acids)

>mRNA_6697 K07188 LIPE, HSL hormone-sensitive lipase (Rhodosporidium toruloides IFO0880)
MLDQLAGKPSPSWRRSQVGLVLLFWISRILLSPAKGPRVLYLRRLNRLLARFTPWQIILS
TLTILYAVRHGDVLLGLQAPEPLARLYSRDYYRATWFVTALDAGFATAMNIRWKWLRDIA
SLLFSAYYLLFANEADEKLRKFRAFCTVEMLRVTWEKTSNPYIRFFTRKDRPPVTVRRKL
FLPRPQGSRYTKPLTVHLYYQGPSLSTAHEVVMDIPGGGFICMNPEHHEERLLRWARKTG
KVVVSFDYGKAPEYPFPYAIDEMYDAYSLLHATKGRCIGMNTSGEKELRVVLTGDSAGAN
IATGVVLRILENRQSASSSRPPSSSAPTTPIPPLPVALVFAYAALSFHFTSWMSSSDLRV
LRSDSHPDIASLLRQKDHLDHRSPLAVVEDLEKRSSGSERGRPKVLRRRRTTSWGRGLVR
GLPGSASFAAIREGYFTSSKKAASSDQIDQAARDEEEEVPVTDETEKSLNERVVWWDDQA
FGGGEQVQRALGEKVREEEKGVGLREKGKEVAAGDGEEGVLSETRLAMTSRTAFFNDRII
SPSMCRAMALLYIGPRNAPDLHSDYHISPIFTPPSLLAQFPPVYLSCGERDPFVDDTVLF
AGKLREAKESRKLELLSRESRFGAGLRMSSSTTARDPILDQDEDDWVQTSIIAGWSHGYL
QMVSLLPAAEKVINMHADWIVEAFERAGEAEVTPTPGVAQPSLRRLLSPIAASPLEAATP
KGRAGTPAQPINVVPPTPVVPQVELDEAVGSPSPTSVTAAPDAEGLKTPAQQTSEGEEDV
LTFTPRRRRGSSNASRTGSPSPAVVPSKVSPPSPTSPTFTRRTSSQTGSHDAHLVTPVER
ALREDLHASPLVKHNPPASLSTPTGATPRSTTPGGARLASTGRPSAFTAPIQSPAPVRSA
SRTLSPPPAPSPVVKGARSNSSGSLPAPQGTVFIDAKELLRRRKEDVVFGISSSNGGTPK
NVSRDGSRKGSDNEGEGEGKGEKVERRKTVD