Protein Info for mRNA_6698 in Rhodosporidium toruloides IFO0880

Name: 15066
Annotation: K00819 rocD, OAT ornithine--oxo-acid transaminase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR01885: ornithine--oxo-acid transaminase
  • amino acids 42 to 459 (418 residues), 653.3 bits, E=6e-201
• PF00202: Aminotran_3
  • amino acids 51 to 457 (407 residues), 409.9 bits, E=1e-126
• PF00155: Aminotran_1_2
  • amino acids 222 to 381 (160 residues), 21.6 bits, E=1.1e-08

Best Hits

KEGG orthology group: K00819, ornithine--oxo-acid transaminase [EC: 2.6.1.13] (inferred from 62% identity to ctp:CTRG_00013)

Predicted SEED Role

"Ornithine aminotransferase (EC 2.6.1.13)" in subsystem Arginine and Ornithine Degradation or Dimethylarginine metabolism (EC 2.6.1.13)

MetaCyc Pathways

• superpathway of L-citrulline metabolism (10/12 steps found)
• L-citrulline biosynthesis (7/8 steps found)
• L-arginine degradation VI (arginase 2 pathway) (4/4 steps found)
• L-arginine degradation I (arginase pathway) (3/3 steps found)
• L-proline biosynthesis III (from L-ornithine) (3/3 steps found)
• L-arginine degradation XIII (reductive Stickland reaction) (4/5 steps found)
• L-ornithine biosynthesis II (3/4 steps found)
• L-N^δ-acetylornithine biosynthesis (5/7 steps found)

KEGG Metabolic Maps

• Arginine and proline metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.6.1.13

Protein Sequence (485 amino acids)

>mRNA_6698 K00819 rocD, OAT ornithine--oxo-acid transaminase (Rhodosporidium toruloides IFO0880)
MATVTSAVRSSINQAFESLGLNGTAPSKASPASNGTVKVSSAEAIALEHEYSAHNYHPLP
VVFERAEGALVWDPEGNEYLDCLSAYSAVNQGHCHPHIVKALTEQAQKLTLSSRAFHTSS
LGPFTKYLTELTGFEMALMMNTGAEAVETAIKVARKWAYKVKGVEKDKAIVLSAEDNFHG
RTIGIISMSTDPEATNDFGPFVPLIGPHCPYTKGDQGRIPYNDVAALERVLDKHGKDVAA
FLVEPIQGEAGIVVPDDDYLEKVQALCKKHNVLLICDEVQTGLARTGKLLCFQHNPRVKP
DMVLLGKALSGGVYPVSAVLSRKDVLLTIKPGEHGSTYGGNPLACAVAQAALEVIVSEDL
CARAQRLGEKMRAGLRDLMHVGPEGGWIKEVRGKGLLNAIVIDQGKSRKGRSAWDLCLVM
KSKGVLAKPTHVNIIRLAPPLVITDEQLDTILARIKESLAVLEELDTIPGADEDHKAADE
PSIDL