Protein Info for mRNA_6701 in Rhodosporidium toruloides IFO0880

Name: 15069
Annotation: K08192 DAL MFS transporter, ACS family, allantoate permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 524 transmembrane" amino acids 57 to 76 (20 residues), see Phobius details amino acids 94 to 113 (20 residues), see Phobius details amino acids 124 to 143 (20 residues), see Phobius details amino acids 150 to 173 (24 residues), see Phobius details amino acids 186 to 206 (21 residues), see Phobius details amino acids 218 to 241 (24 residues), see Phobius details amino acids 290 to 314 (25 residues), see Phobius details amino acids 324 to 344 (21 residues), see Phobius details amino acids 353 to 376 (24 residues), see Phobius details amino acids 382 to 402 (21 residues), see Phobius details amino acids 414 to 433 (20 residues), see Phobius details amino acids 445 to 465 (21 residues), see Phobius details PF07690: MFS_1" amino acids 63 to 430 (368 residues), 123.5 bits, see alignment E=5e-40

Best Hits

KEGG orthology group: None (inferred from 48% identity to ssl:SS1G_08092)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (524 amino acids)

>mRNA_6701 K08192 DAL MFS transporter, ACS family, allantoate permease (Rhodosporidium toruloides IFO0880)
MSSERGSDLEKDQDGQKDVIITSVQGVDAAALATAAVAGQAIDPAEARRLVRKIDSNILP
LMCLIYLIQFLDKTSLSYASIMGIRKDNHLTLGQYSWLSSIFYLAFLVGEWPTNYALQRL
PLAKWTSINVILWGAVLACTAATKDFSGLMAVRFFLGLLESCVTPAFSLITSQWYKKHEQ
GTRTGIWFSMNAFAQIFGAVLAWGFAKHDMAGDFSIPGWKVLFIFLGGITMALGVLLFIF
LPDSPLNARFLTKEERVLAIERIRSNNSGIGNKTHKWYQVREALLDPLTWLYCLYAGAIN
TLNGGITFFSILISSLGFNVLDSLLYGAPGGAVVVVAVLFFLWLGDRIKMRCLCGMIPLT
IGFVGVLLIWLLPFHYKVGRLVGYYISGIASVGFIVVLSLIGSNVAGSTKKSTVLALFFI
FYSIGNLCGPQSWRAKDAPRYAPALATAAAVISFGILDLGLIWFLNARENRRRDRIMSAP
DYVKQENIEFLDQTDRQVALLRSPRSLPCLRPAPMLPHSRIVEC