Protein Info for mRNA_6732 in Rhodosporidium toruloides IFO0880

Name: 15100
Annotation: KOG1530 Rhodanese-related sulfurtransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 188 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF00581: Rhodanese" amino acids 82 to 177 (96 residues), 47.5 bits, see alignment E=1.2e-16

Best Hits

KEGG orthology group: None (inferred from 41% identity to uma:UM04541.1)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (188 amino acids)

>mRNA_6732 KOG1530 Rhodanese-related sulfurtransferase (Rhodosporidium toruloides IFO0880)
MSATRPIARRLSLTLLSRSPILPILSIPILVRPTPVTLPTRAFHATPISRNTHEPSDRAA
KDPRWREGQKVTYDELKPVTQMPSDDVLIVDVREPSEVALGSIPSSVNLPLSVFEKAMSL
DEGDFVKEFGWRKPTKSQPIVFYCRAGARAQTALDLAKHKGFKYLRNYEGSWLDWEKREK
ESNPHGDD