Protein Info for mRNA_6753 in Rhodosporidium toruloides IFO0880

Name: 15121
Annotation: K00999 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 251 transmembrane" amino acids 20 to 40 (21 residues), see Phobius details amino acids 90 to 112 (23 residues), see Phobius details amino acids 152 to 170 (19 residues), see Phobius details amino acids 179 to 196 (18 residues), see Phobius details amino acids 206 to 222 (17 residues), see Phobius details PF01066: CDP-OH_P_transf" amino acids 22 to 84 (63 residues), 49.8 bits, see alignment E=2.4e-17

Best Hits

KEGG orthology group: K00999, CDP-diacylglycerol--inositol 3-phosphatidyltransferase [EC: 2.7.8.11] (inferred from 62% identity to uma:UM00624.1)

Predicted SEED Role

No annotation

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.8.11

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (251 amino acids)

>mRNA_6753 K00999 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase (Rhodosporidium toruloides IFO0880)
MSRSPSPAAPRPRTDENVFLFAPNLIGYTRVILGAAALTYMTTHPKFCTVAYCVSALLDA
VDGQVARALGQTSKFGAILDMVTDRCMTSCLLCFLASAYPRAALLFQFLISLDFSSHYIH
MYASISSGSRSHKTVTKEQSWILWSYYNNSRTLFIFCAANELFFVALYVLSNYHKPLLTS
LHALPPSLLALPAPVLKMVLKTSWPHVVAVLTAPIMVGKQIINVVQFWKAAKALTEADQE
ERYAMQMAKKQ