Protein Info for mRNA_6910 in Rhodosporidium toruloides IFO0880

Name: 15278
Annotation: KOG2287 Galactosyltransferases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1012 transmembrane" amino acids 211 to 235 (25 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1012 amino acids)

>mRNA_6910 KOG2287 Galactosyltransferases (Rhodosporidium toruloides IFO0880)
MGSMSGLGMSALEDGLAGGGGGASSSASSTVFTYGGGGAWSGDEGSGSGSFGGGLEAGSS
CVSSRAHSPAPMSDGGFDGYLSYRAGSRNRSRNTSGYNTPVEKEHAYGPEYYHNHHYQTS
ALLSKLGGTLAPETSPVIGRKQRKPGWWARRAETGRKNTGPRSSASSGGESSAPLLGGVP
GSSSKTGKDRSCFTTFIAALLRQPWFPTQPFTILFSLLLFGCFAATLTTFLVNVLSSDRE
PPPWRQYCQEQRAFPHDLADSLKPVNVFVGVFSVDAAAERRNAIRLSYAKHSKPIDPRTG
TAAHNVQLKFVLGRPRAKWSKRIALEMEMFNDIVVLDVEENMNKGKTFRYFSWAAENATV
PVFYALPGEEGLVDGQRQVGVGFRKADYVVKADDDSFIDLGELERHLRITPRENTYWGYL
VRNRFMAGEVYALSSDLVSYLASYPRPKSWTIGKEDQRVAKWMRNHPNASSIHWISERCY
IYDHPKAGTTYSRGFTFPDHVEQVRTEGRRGISEEERLRRGGELWQSYSTVARWKKPYVA
PVQGLSIEEEVEALVEGGGRWATQGWRSDGGRGPEAVKLEKVVFGPSSDALFVDRLTDGA
GLDSEPDKTVTGVQPGVPDRGVAIPSARTTRFGKDLFRDPEGVRAVSHLRKRAANVQQGP
TRAPLGEGEYEIHNLVRGPFEDGPSPDASDAAASESTGEQVSFNSTLGSSTSSTVPPHTD
APYVNEPTAQIRLGQHAYAVPSYNERFVPAPTLRFDPATLSVRERRMLGREHGGTVAVHY
LKRNEWFFETALALLGREKMWDGGADVPAYPATPYSSNSLLEPYAKDPLVLTSTPPAHLA
QRLEQDDALVAADDRLEVFPALWGAPRMYGSPIVLSNGMIVEGRRAEANRERLVGPPGTR
LEAGAGRGAAATSAGSVSRLGRITGGGRMPMMALAEEDGVEIEIGDEERRKAGKGEVALE
APVVAEASALASYSASSGTLASPSSAPSAGSDASSASSTFDGSSSLVSASSA