Protein Info for mRNA_6939 in Rhodosporidium toruloides IFO0880

Name: 15307
Annotation: K17973 NAA25, MDM20 N-terminal acetyltransferase B complex non-catalytic subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 951 PF09797: NatB_MDM20" amino acids 387 to 721 (335 residues), 220.4 bits, see alignment E=2e-69

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (951 amino acids)

>mRNA_6939 K17973 NAA25, MDM20 N-terminal acetyltransferase B complex non-catalytic subunit (Rhodosporidium toruloides IFO0880)
MAEVIGLVRNFYSSRRALLSPTELRSIGPICSALESLNYKRALLLADQVLKRSPGDASAL
ALKALALSVSSKPLPSSTQQDILKVVEAVKTVKGGAGLGDADVLMILSYVLRGIDRGEMA
LELLTKAAQLHPDNEELALEAFTQYMRSNDCKSAQLISTKMSKRFEDDRYFWWSIMSTIL
QVRDLSHPQGELLLSLVERQLSTRFSTSSTALPADSAGQKPTSASYASADEFHVVTRFLE
LRAQYAALKTDSTATSSSASSPALILPSLPSSDTALSPAKALLAHFASPESDKWCEQNLG
LDLWRREAELAHGSVEGGEWKKLWERLKAALETGDINWHTMFYLIRAALAIAAGSSSTST
STESSSPSSEGLNLLIQTRHLFRSLATDSPRAKVERGYLLGQLEIAREVRLRGWEAVDDL
LALVKEYFERFGTKACSFDDLHPYLQVLSDEETRALREVLVEASEDSLKTVAAATKVMNA
FKILRFLSDECTEAEQEKAEAEKQVKRYFDALPLGKDLPPTELQPADDFALLAGQAYVSA
FHLSHDRSYLERALVLLEHVLLRSKYKYQVRILTINILRLLGASSAALAHYCIFGVKNVQ
YDTLSHLVTARGATFAIESGKDVGVFEEALATSIWYASGQREAREMVVKAFNNNALSKIE
DFSEFRHRLINSLQDGFATLETLRMRVLRGVLDPAATEEAVQTLKRLSEASADSYSDNRD
FKTLPNYQSKKSRQIWQQTEIGERLDADWLSAMSSTYSRFFAPASEVPACEAPSSMTRAE
AALLSFSRLAQVALVAELDQAAEVEQAALVFFKDQAELFAATVDDPKSLPWEVLQIAEVT
LEAFTLLELGISQRLGELASTKAADQAKHSKRLRAFRNSARDLVKPVGAKMTAYGKKVGK
DRPKIVAAVADLQAFPAFDEDRITNVAHALVESRRSAAEALGSAMHRRTVK