Protein Info for mRNA_6947 in Rhodosporidium toruloides IFO0880

Name: 15315
Annotation: K02555 MIH1 M-phase inducer tyrosine phosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 926 PF00581: Rhodanese" amino acids 627 to 734 (108 residues), 49.4 bits, see alignment E=3.1e-17

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (926 amino acids)

>mRNA_6947 K02555 MIH1 M-phase inducer tyrosine phosphatase (Rhodosporidium toruloides IFO0880)
MLSSSPRSDTLVHRAGAAFQGAPLVAPSSPTLAYHDGEISPSFDASFASSMSITSDEQAH
PSPLPAHLRPRSHGPTSSPVDAMDISPAPAPRQPVAGPSSSASRQNRLPAHRPPLFPRPH
SQPTVPSSSAAASTEDHPFLKSLFKPGRSAPPTQTSFAPILPLSIPRSTSPDYFQVPAIV
PVTADPHASSSGSSSRPALPHFATVPPSQSEKLRPPFSKTAFEFRASDNGVESAPVDAFS
DAKGSMPAPRRLSGGSRSRNALPSGWSKSQRQTAPASSLAPPPPPAPAKRKSDPGLPTLR
KEIESSPFRMEVDGELPERKLSSPIALRPASQPRSVSESRAAQPVFGAVEPGSSPPSSDA
DRSGADDRLADMFGFSPGDNLSPIPQSRKRFLEQENSPTPASPTPTGGASLGAVGGRRAF
EKAASTASLPMRVARRQRSAIGLNARPSLASFASLGPPPSTTNENSASFNNNKRHATQAQ
DGKPAPVPLLRASRRSNSVAEASFLCLPQAVQTATASSSSSTNGPLSARDPNVPDDSPRM
LGARASLATMDGSDYFGTVGRRAGASVDLGKSVALSPEMGSPIAGFRKQEAKGKVLPCFG
VKEDGLMRILPETLNDLQSGKYSDDIKEFLIIDCRFDYEYDGGHIEGAINLSELADVEAR
LLNSPNPPKPSTSECVAKEGKTVLIFHCEFSAKRAPTSAKHLRNQDRLKNIAAYPNIHYP
ELYILQGGYEAYYKAFPQRCVGGYVVMDHPEHDAKRSLNLNKFRDQKRQFNRASSFTFGQ
AQHASTLLRAADAAGAMSSTSGFARSRRPLSSSAFTSSRAALEPSGFQFPHGSKKASSSS
TACASAASVAASTATLSITEEDHEGDSSFGTNGSSPGGPAGGSPCPPSSKMGARPSLKLG
TGGAMLYSRRMGLERAATASILTFGQ