Protein Info for mRNA_6956 in Rhodosporidium toruloides IFO0880

Name: 15324
Annotation: K00720 UGCG ceramide glucosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 482 transmembrane" amino acids 6 to 25 (20 residues), see Phobius details amino acids 315 to 348 (34 residues), see Phobius details amino acids 390 to 409 (20 residues), see Phobius details PF13641: Glyco_tranf_2_3" amino acids 68 to 306 (239 residues), 66.2 bits, see alignment E=6.4e-22 PF13506: Glyco_transf_21" amino acids 106 to 234 (129 residues), 77.4 bits, see alignment E=1.5e-25 amino acids 253 to 307 (55 residues), 21.7 bits, see alignment 1.8e-08 PF13632: Glyco_trans_2_3" amino acids 142 to 354 (213 residues), 28.1 bits, see alignment E=2.7e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (482 amino acids)

>mRNA_6956 K00720 UGCG ceramide glucosyltransferase (Rhodosporidium toruloides IFO0880)
MWATVLSWLFFGWYCLLWSLFLLGLRVARKRYSRSPTSQLPPPPLPPSSAPGVSILRPLL
GLDCNLYENLEASFLQDYPKFEIIFSVADEADAAIPIVEDLRRKYPKVPAKLIIGEEIVG
VNPKINNLIRPYRAATHDLLWILDSNVLTSTQCLSRSAPLFSQPARGGRQVGLVHHLPFA
VYPDTLVGSRVEQVYLCSTHAKMYLAINEVAIASCVTGKSCLYRRTDLIRASELKRQRGK
LPLPPPGVTDEPGLAAFGQYLGEDNEIGVALWEELGLRHAMGVEVAGNAVGTMSFGKYFR
RRVRWIRVRKYMVTASTLVEPLTEGVLTAILGALAFSHLFSIPSWLFIPLHTLAWYQLDV
SLYRSLLPASPATSTVTRPPAHDGPSFAYFKAWALRELLALPIWLFAMLGDTVGWRDEGT
VYRVQRDGSVRALKDGESEALVERMWQRISTRWLAGRGGLNGYVTLSPDDVEARASSHIE
PR