Protein Info for mRNA_7000 in Rhodosporidium toruloides IFO0880

Name: 15368
Annotation: K06653 PHO81 CDK inhibitor PHO81

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1137 PF03105: SPX" amino acids 162 to 201 (40 residues), 38.1 bits, see alignment (E = 6.7e-13) PF12796: Ank_2" amino acids 379 to 444 (66 residues), 34.2 bits, see alignment 1.1e-11 amino acids 431 to 511 (81 residues), 30.1 bits, see alignment 2.1e-10 amino acids 522 to 611 (90 residues), 59.8 bits, see alignment E=1.1e-19 PF13637: Ank_4" amino acids 383 to 436 (54 residues), 29.6 bits, see alignment 2.8e-10 amino acids 555 to 606 (52 residues), 48.9 bits, see alignment 2.5e-16 PF00023: Ank" amino acids 416 to 443 (28 residues), 17.7 bits, see alignment (E = 1.4e-06) amino acids 555 to 583 (29 residues), 25.1 bits, see alignment (E = 6.6e-09) amino acids 587 to 610 (24 residues), 19 bits, see alignment (E = 5.5e-07) PF13857: Ank_5" amino acids 572 to 610 (39 residues), 28.9 bits, see alignment (E = 4e-10) PF03009: GDPD" amino acids 860 to 1109 (250 residues), 39.6 bits, see alignment E=1.8e-13

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1137 amino acids)

>mRNA_7000 K06653 PHO81 CDK inhibitor PHO81 (Rhodosporidium toruloides IFO0880)
MKFGKTLQQQIFAQNGFEGWAAYFCDYKGLKKIINSLAKGRPADAALLAAGVRPPRPEAE
EQLPVEATSTEAQLFAHASTANGVVGGEGPTTLLQAHKAAFFFKLERELEKINDFYYQRE
SALKVRLRTLIDKRKLLTSSLSEPNGKVKALSRDSSSFRALYEGFRNFERDLGRLQTYIE
LNATAFRKICKKWDKACRRQADRFGDTRPQQGQPDGQLYLARQVEVQPVFNREFIAQLSD
VASANLLSLENLVGGEAQRGGAAALADGSSIDGTTRSAPHLPTLFDRADRAEALEDLETA
LVSAVKAGDKTVVDEVLGLLLPAEGDSAEGKGPVSRILWRAALEEPAMQSGAEVSPNGAE
PKSGGALIAQDLLDFTFVDDINGRTALHESASAGRLSLVVACLEKGLSVAQADVYGRQPL
HYAAMNGHAGVCRTLLGAQASPTTADLDGYSPIIYSITNGWTSVVETFLAAGVNFESPAP
GGADQLNALSLACQYGHEAIARLLLERGAQIVPNPAGYWPQHLAAREGHAGVLKLLVDAL
KSDGLSVQDKYSQATPLHHAASEGHAESVKILLAAGADVHAVDEFKRTPIHYAAWQGHIE
CVNLLIDHGATKASAAATAEQEEREGARATASTSTMDMDPLADELEADLIPSLSLPPPII
PFRIYGHNYLGDAKCLVHITLGHPNTTLAPYPPPVRLIDQPGHGHPASLKLVITPKPDSS
GTSIPHSVILPLSDDREVFSFQVDTLADFSLEFDLFPTFGSKMIGKAVAVPATFDDLKSQ
GSYVVPIVDPHLKVVGDISFEMNVVKPFGRAQLQIGGQFEVYWKTTTSLQTVPVPGDAGQ
NTSSVVTASSLSGEHVRIVVQVTKDGHPVAYPLWKLPVDGLDIYVADVTLEQFEALARRL
GKTLDPAKVKNQEDPSAWHQAIADALIPLEELLTVLPASLGVNLELRYPTRSDVRRLALA
RTLEVNEFVDSVLTTVYKSIQTSPSSSEPESSTAHRRVVLSSFNPVVCTALNWKQPNFSV
FFASYCGLSRTGNAGGGVAGDITQPGRLVPANRVEEDRRCTSIREAVKFARANNLLGIML
DATMLVQIPSLIQSAREHGLLITTFGTASRVVHADAHMADGVLSYATSDFLKQTMAN