Protein Info for mRNA_7058 in Rhodosporidium toruloides IFO0880

Name: 15426
Annotation: KOG0206 P-type ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1638 transmembrane" amino acids 123 to 140 (18 residues), see Phobius details amino acids 146 to 165 (20 residues), see Phobius details amino acids 557 to 579 (23 residues), see Phobius details amino acids 606 to 626 (21 residues), see Phobius details amino acids 1218 to 1236 (19 residues), see Phobius details amino acids 1246 to 1267 (22 residues), see Phobius details amino acids 1295 to 1319 (25 residues), see Phobius details amino acids 1331 to 1351 (21 residues), see Phobius details amino acids 1361 to 1384 (24 residues), see Phobius details amino acids 1404 to 1424 (21 residues), see Phobius details PF16209: PhoLip_ATPase_N" amino acids 94 to 146 (53 residues), 78.1 bits, see alignment (E = 8.2e-26) TIGR01652: phospholipid-translocating P-type ATPase, flippase" amino acids 96 to 1440 (1345 residues), 1148.7 bits, see alignment E=0 PF00702: Hydrolase" amino acids 669 to 1001 (333 residues), 29.7 bits, see alignment E=1.9e-10 PF13246: Cation_ATPase" amino acids 786 to 884 (99 residues), 37.2 bits, see alignment 6.5e-13 TIGR01494: HAD ATPase, P-type, family IC" amino acids 1127 to 1237 (111 residues), 90.1 bits, see alignment 1.1e-29 PF16212: PhoLip_ATPase_C" amino acids 1183 to 1433 (251 residues), 256.3 bits, see alignment E=9.3e-80

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1638 amino acids)

>mRNA_7058 KOG0206 P-type ATPase (Rhodosporidium toruloides IFO0880)
MGVTPIRRKGPQNKFTRWLARASDFDLTAVFSRPHRNPYPRQVLVNTPVPPEAFTTAPKV
PIPGWNRTVKGEDGKVIRKHKRGFGTKEVPAPGWTFVSNQVLTSKYNIFTFVPRNLLEQF
RRVANIFFLVLVILQFFPRFTTVNPGLSALPLIVVIFITAVKDGYEDLKRHQSDRAINNI
KVIALRGTYHNPNLTLQKSRTFGLPKFIRNWWGQRRLVKEAEEEEREEAEFREKQNKGFW
GKRSMRVGRRKGRNGEVPQEKAAPLVEDVEAEEERDGLGNLELPRTAPGGGTVQAAREEG
NRARSSTVGTKGSAKGRSRANTSAGLSYEAPIPARHQRLEGDYYADDAEDAEFHHGPTDT
AGHPNAEQQPGSGIHLHKPHLHVGVGQRYDRPMWVKENWEDLRVGDFVRLHGDESVPADI
IVCATSEEENVCYVETKNLDGETNLKSRSAVPELTHLRTSSAIANEAKFVIRAEPPDVNM
FTYNAAIELHDGRTDKEGRPLKCPVNLTTMLLRGTVIRNTEWVVGVVCMTGQDTKIVMNA
GGTPSKRSKVERQMNPMVFLNLFLLALMTVMCALADHYLQVQKYPQGAYWLFGDNRSDDN
PNINGIITWANALIAFQNIVPISLYISIEFTRLVQAGYIWGDDEMKGNGRRTTARSWNLS
DDLGQIEYIFSDKTGTLTQNAMLFRQCSIAGKVYVGDEQPAATDTTVLPPEKALSSSSSS
GDESASPTNGNGSSDDKAKTKLAEQVLAPFHDSQIEADLAKRDSTQARNLYNFFMNLALC
HTVLTSEEDGLISYKAQSPDEAALVQAAADVGFVFLGRDKDVLRVQTPHDDDVVEFQLLN
VLEFTSARKRMSVVIRKLSEGEGHDQLLLLTKGADNVIFERLGHGNEELKRETDKHLEDF
ANEGLRTLCLAWKPLDEATYEQWERRFHEATTLIDNREEEIERVSDELERDLKLLGATAI
EDKLQDGVPEAIADLKRAGIKIWVATGDKLETAIAIAKTCNLLSRDMNLIVVKGGEYGQA
NSAYAQLRSALERFFDAEGLADQLENQPPDAQKRPEGPRRSSSMRRSFQLHRTTTGVSGV
SDIVGDDNGERPGGYGLVIDGASLRHAFGEPWTKDLLLELATRCRAVVCCRTSPLQKALI
VRLVKDGLGSMCLAIGDGANDVSMIQAADIGVGVAGEEGLQAVNSSDYAMGQFRFLKRLL
LVHGQWSYLRNSNMIVNFFYKEIIGIGVLFWFQFYCGYSATTVYEYTYLLFWNVFWTLVP
VIFIGIFDRHVGERVLMAIPELYERGRRGKLFGIVRFSIYMLDGIYQSAVIYFFLLYAYD
TTTARRDGYDIQMYEFSTVMAVAAVLAANFYNGLNTYSWNWWVLAGVLIGPVLIVLYTAV
YSAFPPTLIWTYVWGNNHFLWPSAYWWLGLMFTIILSLGPRYLYRAVKEAYFPDDVDILR
AMEKRDPRHDWVHDPMMPHHPDGAHFEPLALTPDSASASSPMIARRTASRSSSRRPLPQR
DSYQLGRARTHQSLTHDMSTGLARVGTGSGYAFDEGVGLNLERYTTRGSEASRTRPRKGS
VRVGKVELNPFARKSDKTRDRSASFGARLFRHGNRKSTVPEEEPESSTAPPVPTVPLTGH
EATTAPLTKDTDSVGHAV