Protein Info for mRNA_7207 in Rhodosporidium toruloides IFO0880

Name: 15575
Annotation: KOG1209 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 347 transmembrane" amino acids 51 to 73 (23 residues), see Phobius details amino acids 317 to 337 (21 residues), see Phobius details PF13561: adh_short_C2" amino acids 82 to 256 (175 residues), 90.5 bits, see alignment E=1.3e-29 PF00106: adh_short" amino acids 83 to 253 (171 residues), 136.1 bits, see alignment E=1.1e-43

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (347 amino acids)

>mRNA_7207 KOG1209 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases (Rhodosporidium toruloides IFO0880)
MDPSSACRSGSLYQHPSVRQPFAVIESLFLACSWRTKRELASGKMATGRKVVLVTGSSAG
GIGCVCFSSSFVLPHLRFCEANALCQEFHKRGCIVYASARRLESLQTLPEEVHKVALDVT
SLESCRSVVDKIVKEQGRIDVLVNNAGAGGTGAVLDADVESEEGARATFETNFFAPLRLS
KLVAVPMAERRSGLIVNIGSIVGNIPTPWSGIYSASKAALHSITETLRMEVKGLGIDVML
VAPGAITSQFGKKQLNSFQMPEDSLFKDVADKIAERAEMSQRADHTMPAAVLASGIVSRA
LRKRPARYYTAGGKSWLFWVFERIPRIVVWTLLGRILGTDKVGRKRR